RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
TVP23C-208ENST00000581273 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
TVP23C-208ENST00000581273 INE1O15225 51 aa3.43□□□□□ -1.86
TVP23C-208ENST00000581273 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
TVP23C-208ENST00000581273 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
TVP23C-208ENST00000581273 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
TVP23C-208ENST00000581273 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
TVP23C-208ENST00000581273 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
TVP23C-208ENST00000581273 TNP1P09430 55 aa3.41□□□□□ -1.86
TVP23C-208ENST00000581273 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
TVP23C-208ENST00000581273 MT2AP02795 61 aa3.32□□□□□ -1.88
TVP23C-208ENST00000581273 MT3P25713 68 aa3.32□□□□□ -1.88
TVP23C-208ENST00000581273 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
TVP23C-208ENST00000581273 MT1FP04733 61 aa3.29□□□□□ -1.88
TVP23C-208ENST00000581273 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
TVP23C-208ENST00000581273 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
TVP23C-208ENST00000581273 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
TVP23C-208ENST00000581273 SPRR2EP22531 72 aa3.11□□□□□ -1.91
TVP23C-208ENST00000581273 SPRR2BP35325 72 aa3.11□□□□□ -1.91
TVP23C-208ENST00000581273 SPRR2AP35326 72 aa3.11□□□□□ -1.91
TVP23C-208ENST00000581273 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
TVP23C-208ENST00000581273 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
TVP23C-208ENST00000581273 SPRR2DP22532 72 aa3.01□□□□□ -1.93
TVP23C-208ENST00000581273 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
TVP23C-208ENST00000581273 LCE3AQ5TA76 89 aa3□□□□□ -1.93
TVP23C-208ENST00000581273 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
TVP23C-208ENST00000581273 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
TVP23C-208ENST00000581273 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
TVP23C-208ENST00000581273 MT1BP07438 61 aa2.94□□□□□ -1.94
TVP23C-208ENST00000581273 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
TVP23C-208ENST00000581273 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
TVP23C-208ENST00000581273 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
TVP23C-208ENST00000581273 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
TVP23C-208ENST00000581273 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
TVP23C-208ENST00000581273 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
TVP23C-208ENST00000581273 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
TVP23C-208ENST00000581273 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
TVP23C-208ENST00000581273 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
TVP23C-208ENST00000581273 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
TVP23C-208ENST00000581273 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
TVP23C-208ENST00000581273 MT1XP80297 61 aa2.73□□□□□ -1.97
TVP23C-208ENST00000581273 MT4P47944 62 aa2.72□□□□□ -1.97
TVP23C-208ENST00000581273 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
TVP23C-208ENST00000581273 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
TVP23C-208ENST00000581273 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
TVP23C-208ENST00000581273 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
TVP23C-208ENST00000581273 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
TVP23C-208ENST00000581273 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TVP23C-208ENST00000581273 MUC5ACP98088 5654 aa2.54□□□□□ -2
TVP23C-208ENST00000581273 MT1EP04732 61 aa2.44□□□□□ -2.02
TVP23C-208ENST00000581273 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
TVP23C-208ENST00000581273 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
TVP23C-208ENST00000581273 MT1LQ93083 61 aa2.42□□□□□ -2.02
TVP23C-208ENST00000581273 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
TVP23C-208ENST00000581273 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
TVP23C-208ENST00000581273 MT1GP13640 62 aa2.35□□□□□ -2.03
TVP23C-208ENST00000581273 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
TVP23C-208ENST00000581273 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
TVP23C-208ENST00000581273 MT1MQ8N339 61 aa2.32□□□□□ -2.04
TVP23C-208ENST00000581273 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
TVP23C-208ENST00000581273 MT1AP04731 61 aa2.31□□□□□ -2.04
TVP23C-208ENST00000581273 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
TVP23C-208ENST00000581273 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
TVP23C-208ENST00000581273 PRM1P04553 51 aa2.16□□□□□ -2.06
TVP23C-208ENST00000581273 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
TVP23C-208ENST00000581273 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
TVP23C-208ENST00000581273 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
TVP23C-208ENST00000581273 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
TVP23C-208ENST00000581273 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
TVP23C-208ENST00000581273 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
TVP23C-208ENST00000581273 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
TVP23C-208ENST00000581273 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
TVP23C-208ENST00000581273 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
TVP23C-208ENST00000581273 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
TVP23C-208ENST00000581273 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
TVP23C-208ENST00000581273 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TVP23C-208ENST00000581273 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
TVP23C-208ENST00000581273 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms