RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
RIOK3-204ENST00000581220 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
RIOK3-204ENST00000581220 MT1HP80294 61 aa3.41□□□□□ -1.86
RIOK3-204ENST00000581220 MT2AP02795 61 aa3.4□□□□□ -1.87
RIOK3-204ENST00000581220 MT1FP04733 61 aa3.4□□□□□ -1.87
RIOK3-204ENST00000581220 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
RIOK3-204ENST00000581220 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
RIOK3-204ENST00000581220 INE1O15225 51 aa3.37□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
RIOK3-204ENST00000581220 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
RIOK3-204ENST00000581220 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
RIOK3-204ENST00000581220 MT1XP80297 61 aa3.33□□□□□ -1.88
RIOK3-204ENST00000581220 MT1BP07438 61 aa3.32□□□□□ -1.88
RIOK3-204ENST00000581220 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
RIOK3-204ENST00000581220 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
RIOK3-204ENST00000581220 KRTAP10-7P60409 375 aaPredicted RBP3.25□□□□□ -1.89
RIOK3-204ENST00000581220 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
RIOK3-204ENST00000581220 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
RIOK3-204ENST00000581220 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.9
RIOK3-204ENST00000581220 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.92
RIOK3-204ENST00000581220 HMCN1Q96RW7 5635 aa3.02□□□□□ -1.93
RIOK3-204ENST00000581220 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
RIOK3-204ENST00000581220 KMT2DO14686 5537 aa2.99□□□□□ -1.93
RIOK3-204ENST00000581220 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
RIOK3-204ENST00000581220 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
RIOK3-204ENST00000581220 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
RIOK3-204ENST00000581220 SPRR2EP22531 72 aa2.91□□□□□ -1.94
RIOK3-204ENST00000581220 SPRR2BP35325 72 aa2.91□□□□□ -1.94
RIOK3-204ENST00000581220 SPRR2AP35326 72 aa2.91□□□□□ -1.94
RIOK3-204ENST00000581220 MT1LQ93083 61 aa2.9□□□□□ -1.95
RIOK3-204ENST00000581220 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
RIOK3-204ENST00000581220 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
RIOK3-204ENST00000581220 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
RIOK3-204ENST00000581220 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
RIOK3-204ENST00000581220 MT1EP04732 61 aa2.87□□□□□ -1.95
RIOK3-204ENST00000581220 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
RIOK3-204ENST00000581220 SPRR2DP22532 72 aa2.86□□□□□ -1.95
RIOK3-204ENST00000581220 MT1GP13640 62 aa2.72□□□□□ -1.97
RIOK3-204ENST00000581220 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
RIOK3-204ENST00000581220 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
RIOK3-204ENST00000581220 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
RIOK3-204ENST00000581220 MT1MQ8N339 61 aa2.68□□□□□ -1.98
RIOK3-204ENST00000581220 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
RIOK3-204ENST00000581220 MT3P25713 68 aa2.54□□□□□ -2
RIOK3-204ENST00000581220 MT1AP04731 61 aa2.52□□□□□ -2.01
RIOK3-204ENST00000581220 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
RIOK3-204ENST00000581220 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
RIOK3-204ENST00000581220 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
RIOK3-204ENST00000581220 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
RIOK3-204ENST00000581220 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
RIOK3-204ENST00000581220 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
RIOK3-204ENST00000581220 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
RIOK3-204ENST00000581220 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
RIOK3-204ENST00000581220 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
RIOK3-204ENST00000581220 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
RIOK3-204ENST00000581220 PRM1P04553 51 aa2.38□□□□□ -2.03
RIOK3-204ENST00000581220 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
RIOK3-204ENST00000581220 MT4P47944 62 aa2.37□□□□□ -2.03
RIOK3-204ENST00000581220 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
RIOK3-204ENST00000581220 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
RIOK3-204ENST00000581220 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
RIOK3-204ENST00000581220 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
RIOK3-204ENST00000581220 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
RIOK3-204ENST00000581220 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
RIOK3-204ENST00000581220 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
RIOK3-204ENST00000581220 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
RIOK3-204ENST00000581220 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
RIOK3-204ENST00000581220 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
RIOK3-204ENST00000581220 LCE1CQ5T751 118 aa1.65□□□□□ -2.14
RIOK3-204ENST00000581220 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
RIOK3-204ENST00000581220 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
RIOK3-204ENST00000581220 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
RIOK3-204ENST00000581220 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 60.2 ms