RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SNORD3C-201ENST00000580533 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
SNORD3C-201ENST00000580533 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
SNORD3C-201ENST00000580533 KMT2DO14686 5537 aa4.57□□□□□ -1.68
SNORD3C-201ENST00000580533 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
SNORD3C-201ENST00000580533 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
SNORD3C-201ENST00000580533 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
SNORD3C-201ENST00000580533 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
SNORD3C-201ENST00000580533 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
SNORD3C-201ENST00000580533 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
SNORD3C-201ENST00000580533 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
SNORD3C-201ENST00000580533 NEBP20929 6669 aa4.37□□□□□ -1.71
SNORD3C-201ENST00000580533 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
SNORD3C-201ENST00000580533 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
SNORD3C-201ENST00000580533 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
SNORD3C-201ENST00000580533 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
SNORD3C-201ENST00000580533 MT1EP04732 61 aa4.32□□□□□ -1.72
SNORD3C-201ENST00000580533 SPRR2EP22531 72 aa4.32□□□□□ -1.72
SNORD3C-201ENST00000580533 SPRR2BP35325 72 aa4.32□□□□□ -1.72
SNORD3C-201ENST00000580533 SPRR2AP35326 72 aa4.32□□□□□ -1.72
SNORD3C-201ENST00000580533 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
SNORD3C-201ENST00000580533 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
SNORD3C-201ENST00000580533 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
SNORD3C-201ENST00000580533 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
SNORD3C-201ENST00000580533 MT1GP13640 62 aa4.2□□□□□ -1.74
SNORD3C-201ENST00000580533 MT1LQ93083 61 aa4.19□□□□□ -1.74
SNORD3C-201ENST00000580533 SPRR2DP22532 72 aa4.18□□□□□ -1.74
SNORD3C-201ENST00000580533 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
SNORD3C-201ENST00000580533 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SNORD3C-201ENST00000580533 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
SNORD3C-201ENST00000580533 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
SNORD3C-201ENST00000580533 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
SNORD3C-201ENST00000580533 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SNORD3C-201ENST00000580533 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
SNORD3C-201ENST00000580533 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
SNORD3C-201ENST00000580533 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
SNORD3C-201ENST00000580533 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
SNORD3C-201ENST00000580533 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
SNORD3C-201ENST00000580533 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SNORD3C-201ENST00000580533 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
SNORD3C-201ENST00000580533 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
SNORD3C-201ENST00000580533 INE1O15225 51 aa3.64□□□□□ -1.83
SNORD3C-201ENST00000580533 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
SNORD3C-201ENST00000580533 MT1AP04731 61 aa3.59□□□□□ -1.83
SNORD3C-201ENST00000580533 MT4P47944 62 aa3.59□□□□□ -1.83
SNORD3C-201ENST00000580533 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
SNORD3C-201ENST00000580533 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
SNORD3C-201ENST00000580533 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SNORD3C-201ENST00000580533 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
SNORD3C-201ENST00000580533 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
SNORD3C-201ENST00000580533 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
SNORD3C-201ENST00000580533 MT3P25713 68 aa3.31□□□□□ -1.88
SNORD3C-201ENST00000580533 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SNORD3C-201ENST00000580533 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
SNORD3C-201ENST00000580533 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
SNORD3C-201ENST00000580533 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SNORD3C-201ENST00000580533 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SNORD3C-201ENST00000580533 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
SNORD3C-201ENST00000580533 LCE1FQ5T754 118 aa3□□□□□ -1.93
SNORD3C-201ENST00000580533 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SNORD3C-201ENST00000580533 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SNORD3C-201ENST00000580533 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SNORD3C-201ENST00000580533 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SNORD3C-201ENST00000580533 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
SNORD3C-201ENST00000580533 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SNORD3C-201ENST00000580533 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SNORD3C-201ENST00000580533 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
SNORD3C-201ENST00000580533 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
SNORD3C-201ENST00000580533 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
SNORD3C-201ENST00000580533 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SNORD3C-201ENST00000580533 PRM1P04553 51 aa2.67□□□□□ -1.98
SNORD3C-201ENST00000580533 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SNORD3C-201ENST00000580533 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SNORD3C-201ENST00000580533 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SNORD3C-201ENST00000580533 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
SNORD3C-201ENST00000580533 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SNORD3C-201ENST00000580533 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 102.6 ms