RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
SMARCD2-208ENST00000580054 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
SMARCD2-208ENST00000580054 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
SMARCD2-208ENST00000580054 MT4P47944 62 aa3.61□□□□□ -1.83
SMARCD2-208ENST00000580054 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
SMARCD2-208ENST00000580054 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
SMARCD2-208ENST00000580054 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
SMARCD2-208ENST00000580054 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SMARCD2-208ENST00000580054 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SMARCD2-208ENST00000580054 TNP1P09430 55 aa3.51□□□□□ -1.85
SMARCD2-208ENST00000580054 ROMO1P60602 79 aa3.51□□□□□ -1.85
SMARCD2-208ENST00000580054 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
SMARCD2-208ENST00000580054 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
SMARCD2-208ENST00000580054 MT1EP04732 61 aa3.48□□□□□ -1.85
SMARCD2-208ENST00000580054 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SMARCD2-208ENST00000580054 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
SMARCD2-208ENST00000580054 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
SMARCD2-208ENST00000580054 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SMARCD2-208ENST00000580054 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
SMARCD2-208ENST00000580054 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
SMARCD2-208ENST00000580054 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
SMARCD2-208ENST00000580054 MT1GP13640 62 aa3.36□□□□□ -1.87
SMARCD2-208ENST00000580054 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
SMARCD2-208ENST00000580054 MT1MQ8N339 61 aa3.34□□□□□ -1.87
SMARCD2-208ENST00000580054 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
SMARCD2-208ENST00000580054 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
SMARCD2-208ENST00000580054 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SMARCD2-208ENST00000580054 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SMARCD2-208ENST00000580054 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SMARCD2-208ENST00000580054 MT1LQ93083 61 aa3.25□□□□□ -1.89
SMARCD2-208ENST00000580054 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
SMARCD2-208ENST00000580054 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
SMARCD2-208ENST00000580054 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
SMARCD2-208ENST00000580054 SVIPQ8NHG7 77 aa3.15□□□□□ -1.91
SMARCD2-208ENST00000580054 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SMARCD2-208ENST00000580054 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
SMARCD2-208ENST00000580054 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
SMARCD2-208ENST00000580054 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
SMARCD2-208ENST00000580054 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
SMARCD2-208ENST00000580054 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SMARCD2-208ENST00000580054 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
SMARCD2-208ENST00000580054 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
SMARCD2-208ENST00000580054 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SMARCD2-208ENST00000580054 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
SMARCD2-208ENST00000580054 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
SMARCD2-208ENST00000580054 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
SMARCD2-208ENST00000580054 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SMARCD2-208ENST00000580054 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
SMARCD2-208ENST00000580054 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
SMARCD2-208ENST00000580054 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
SMARCD2-208ENST00000580054 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
SMARCD2-208ENST00000580054 MT1AP04731 61 aa2.75□□□□□ -1.97
SMARCD2-208ENST00000580054 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
SMARCD2-208ENST00000580054 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
SMARCD2-208ENST00000580054 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
SMARCD2-208ENST00000580054 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
SMARCD2-208ENST00000580054 MT3P25713 68 aa2.52□□□□□ -2.01
SMARCD2-208ENST00000580054 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
SMARCD2-208ENST00000580054 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SMARCD2-208ENST00000580054 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
SMARCD2-208ENST00000580054 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SMARCD2-208ENST00000580054 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
SMARCD2-208ENST00000580054 A0A0A0MQY5 61 aa2.28□□□□□ -2.04
SMARCD2-208ENST00000580054 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
SMARCD2-208ENST00000580054 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SMARCD2-208ENST00000580054 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
SMARCD2-208ENST00000580054 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
SMARCD2-208ENST00000580054 INE1O15225 51 aa2.15□□□□□ -2.07
SMARCD2-208ENST00000580054 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SMARCD2-208ENST00000580054 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
SMARCD2-208ENST00000580054 H3BS24 57 aa2.04□□□□□ -2.08
SMARCD2-208ENST00000580054 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
SMARCD2-208ENST00000580054 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SMARCD2-208ENST00000580054 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
SMARCD2-208ENST00000580054 PRM1P04553 51 aa1.78□□□□□ -2.12
SMARCD2-208ENST00000580054 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SMARCD2-208ENST00000580054 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SMARCD2-208ENST00000580054 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 41.5 ms