RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 MGAM2Q2M2H8 2515 aa1.41□□□□□ -2.18
COPS3-216ENST00000579716 USP34Q70CQ2 3546 aa1.4□□□□□ -2.18
COPS3-216ENST00000579716 EP400Q96L91 3159 aa1.4□□□□□ -2.19
COPS3-216ENST00000579716 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.19
COPS3-216ENST00000579716 DNAH5Q8TE73 4624 aa1.39□□□□□ -2.19
COPS3-216ENST00000579716 TRRAPQ9Y4A5 3859 aa1.39□□□□□ -2.19
COPS3-216ENST00000579716 SPTAN1Q13813 2472 aaKnown RBP1.39□□□□□ -2.19
COPS3-216ENST00000579716 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
COPS3-216ENST00000579716 LPAP08519 4548 aa1.39□□□□□ -2.19
COPS3-216ENST00000579716 ADGRG4Q8IZF6 3080 aa1.38□□□□□ -2.19
COPS3-216ENST00000579716 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
COPS3-216ENST00000579716 KMT2CQ8NEZ4 4911 aaKnown RBP1.37□□□□□ -2.19
COPS3-216ENST00000579716 RYR1P21817 5038 aa1.36□□□□□ -2.19
COPS3-216ENST00000579716 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
COPS3-216ENST00000579716 FAT1Q14517 4588 aa1.34□□□□□ -2.2
COPS3-216ENST00000579716 PCNTO95613 3336 aa1.33□□□□□ -2.2
COPS3-216ENST00000579716 SPRR2EP22531 72 aa1.33□□□□□ -2.2
COPS3-216ENST00000579716 RYR2Q92736 4967 aa1.33□□□□□ -2.2
COPS3-216ENST00000579716 MYO9AB2RTY4 2548 aa1.32□□□□□ -2.2
COPS3-216ENST00000579716 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
COPS3-216ENST00000579716 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
COPS3-216ENST00000579716 KMT2DO14686 5537 aa1.31□□□□□ -2.2
COPS3-216ENST00000579716 ASPMQ8IZT6 3477 aa1.3□□□□□ -2.2
COPS3-216ENST00000579716 LAMA2P24043 3122 aaKnown RBP1.3□□□□□ -2.2
COPS3-216ENST00000579716 DYNC1H1Q14204 4646 aaKnown RBP1.3□□□□□ -2.2
COPS3-216ENST00000579716 TENM1Q9UKZ4 2725 aa1.3□□□□□ -2.2
COPS3-216ENST00000579716 MT1EP04732 61 aa1.28□□□□□ -2.2
COPS3-216ENST00000579716 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
COPS3-216ENST00000579716 MDN1Q9NU22 5596 aa1.27□□□□□ -2.21
COPS3-216ENST00000579716 MYO15AQ9UKN7 3530 aa1.26□□□□□ -2.21
COPS3-216ENST00000579716 VCANP13611 3396 aa1.25□□□□□ -2.21
COPS3-216ENST00000579716 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
COPS3-216ENST00000579716 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
COPS3-216ENST00000579716 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
COPS3-216ENST00000579716 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
COPS3-216ENST00000579716 MT1LQ93083 61 aa1.21□□□□□ -2.22
COPS3-216ENST00000579716 EYSQ5T1H1 3165 aa1.21□□□□□ -2.22
COPS3-216ENST00000579716 EPPK1P58107 5090 aaKnown RBP1.2□□□□□ -2.22
COPS3-216ENST00000579716 LRP1BQ9NZR2 4599 aa1.19□□□□□ -2.22
COPS3-216ENST00000579716 HERC1Q15751 4861 aa1.18□□□□□ -2.22
COPS3-216ENST00000579716 MT1HP80294 61 aa1.18□□□□□ -2.22
COPS3-216ENST00000579716 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
COPS3-216ENST00000579716 CENPFP49454 3210 aa1.15□□□□□ -2.22
COPS3-216ENST00000579716 BRCA2P51587 3418 aa1.15□□□□□ -2.23
COPS3-216ENST00000579716 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
COPS3-216ENST00000579716 SSPOA2VEC9 5147 aa1.14□□□□□ -2.23
COPS3-216ENST00000579716 HYDINQ4G0P3 5121 aa1.14□□□□□ -2.23
COPS3-216ENST00000579716 RYR3Q15413 4870 aa1.14□□□□□ -2.23
COPS3-216ENST00000579716 FAT4Q6V0I7 4981 aa1.13□□□□□ -2.23
COPS3-216ENST00000579716 STARD9Q9P2P6 4700 aa1.12□□□□□ -2.23
COPS3-216ENST00000579716 WDFY3Q8IZQ1 3526 aa1.11□□□□□ -2.23
COPS3-216ENST00000579716 UNC80Q8N2C7 3258 aa1.11□□□□□ -2.23
COPS3-216ENST00000579716 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
COPS3-216ENST00000579716 DNAH14Q0VDD8 3507 aa1.06□□□□□ -2.24
COPS3-216ENST00000579716 MT1XP80297 61 aa1.04□□□□□ -2.24
COPS3-216ENST00000579716 BIRC6Q9NR09 4857 aa1.03□□□□□ -2.24
COPS3-216ENST00000579716 KRTAP19-8Q3LI54 63 aa1.03□□□□□ -2.24
COPS3-216ENST00000579716 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
COPS3-216ENST00000579716 LRP2P98164 4655 aa1.02□□□□□ -2.25
COPS3-216ENST00000579716 DNHD1Q96M86 4753 aa0.98□□□□□ -2.25
COPS3-216ENST00000579716 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
COPS3-216ENST00000579716 CDH23Q9H251 3354 aa0.91□□□□□ -2.26
COPS3-216ENST00000579716 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
COPS3-216ENST00000579716 MT1GP13640 62 aa0.89□□□□□ -2.27
COPS3-216ENST00000579716 KRTAP19-2Q3LHN2 52 aa0.84□□□□□ -2.27
COPS3-216ENST00000579716 HERC2O95714 4834 aa0.84□□□□□ -2.28
COPS3-216ENST00000579716 MT2AP02795 61 aa0.82□□□□□ -2.28
COPS3-216ENST00000579716 USH2AO75445 5202 aa0.81□□□□□ -2.28
COPS3-216ENST00000579716 MT1BP07438 61 aa0.81□□□□□ -2.28
COPS3-216ENST00000579716 MT1MQ8N339 61 aa0.8□□□□□ -2.28
COPS3-216ENST00000579716 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
COPS3-216ENST00000579716 MUC12Q9UKN1 5478 aa0.74□□□□□ -2.29
COPS3-216ENST00000579716 MT1HL1P0DM35 61 aa0.68□□□□□ -2.3
COPS3-216ENST00000579716 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
COPS3-216ENST00000579716 MT1FP04733 61 aa0.6□□□□□ -2.31
COPS3-216ENST00000579716 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
COPS3-216ENST00000579716 MT4P47944 62 aa0.25□□□□□ -2.37
COPS3-216ENST00000579716 KRTAP20-2Q3LI61 65 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 133.7 ms