RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SPRR2BP35325 72 aa5.85□□□□□ -1.47
SLC6A4-205ENST00000579221 SPRR2AP35326 72 aa5.85□□□□□ -1.47
SLC6A4-205ENST00000579221 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
SLC6A4-205ENST00000579221 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.47
SLC6A4-205ENST00000579221 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
SLC6A4-205ENST00000579221 H3BS24 57 aa5.8□□□□□ -1.48
SLC6A4-205ENST00000579221 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
SLC6A4-205ENST00000579221 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
SLC6A4-205ENST00000579221 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
SLC6A4-205ENST00000579221 ROMO1P60602 79 aa5.76□□□□□ -1.49
SLC6A4-205ENST00000579221 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
SLC6A4-205ENST00000579221 MT1EP04732 61 aa5.74□□□□□ -1.49
SLC6A4-205ENST00000579221 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
SLC6A4-205ENST00000579221 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
SLC6A4-205ENST00000579221 SPRR2DP22532 72 aa5.65□□□□□ -1.5
SLC6A4-205ENST00000579221 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
SLC6A4-205ENST00000579221 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
SLC6A4-205ENST00000579221 KRTAP20-1Q3LI63 56 aa5.62□□□□□ -1.51
SLC6A4-205ENST00000579221 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
SLC6A4-205ENST00000579221 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
SLC6A4-205ENST00000579221 MT1GP13640 62 aa5.57□□□□□ -1.52
SLC6A4-205ENST00000579221 MT1LQ93083 61 aa5.55□□□□□ -1.52
SLC6A4-205ENST00000579221 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
SLC6A4-205ENST00000579221 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SLC6A4-205ENST00000579221 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
SLC6A4-205ENST00000579221 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
SLC6A4-205ENST00000579221 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
SLC6A4-205ENST00000579221 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
SLC6A4-205ENST00000579221 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
SLC6A4-205ENST00000579221 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
SLC6A4-205ENST00000579221 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
SLC6A4-205ENST00000579221 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
SLC6A4-205ENST00000579221 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
SLC6A4-205ENST00000579221 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
SLC6A4-205ENST00000579221 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
SLC6A4-205ENST00000579221 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
SLC6A4-205ENST00000579221 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
SLC6A4-205ENST00000579221 MT4P47944 62 aa4.9□□□□□ -1.63
SLC6A4-205ENST00000579221 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
SLC6A4-205ENST00000579221 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
SLC6A4-205ENST00000579221 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
SLC6A4-205ENST00000579221 MT1AP04731 61 aa4.74□□□□□ -1.65
SLC6A4-205ENST00000579221 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
SLC6A4-205ENST00000579221 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
SLC6A4-205ENST00000579221 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
SLC6A4-205ENST00000579221 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
SLC6A4-205ENST00000579221 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
SLC6A4-205ENST00000579221 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
SLC6A4-205ENST00000579221 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
SLC6A4-205ENST00000579221 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
SLC6A4-205ENST00000579221 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
SLC6A4-205ENST00000579221 MT3P25713 68 aa4.35□□□□□ -1.71
SLC6A4-205ENST00000579221 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
SLC6A4-205ENST00000579221 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SLC6A4-205ENST00000579221 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SLC6A4-205ENST00000579221 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
SLC6A4-205ENST00000579221 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
SLC6A4-205ENST00000579221 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
SLC6A4-205ENST00000579221 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SLC6A4-205ENST00000579221 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
SLC6A4-205ENST00000579221 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SLC6A4-205ENST00000579221 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
SLC6A4-205ENST00000579221 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
SLC6A4-205ENST00000579221 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
SLC6A4-205ENST00000579221 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SLC6A4-205ENST00000579221 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
SLC6A4-205ENST00000579221 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SLC6A4-205ENST00000579221 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SLC6A4-205ENST00000579221 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
SLC6A4-205ENST00000579221 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
SLC6A4-205ENST00000579221 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SLC6A4-205ENST00000579221 INE1O15225 51 aa3.16□□□□□ -1.9
SLC6A4-205ENST00000579221 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
SLC6A4-205ENST00000579221 PRM1P04553 51 aa2.95□□□□□ -1.94
SLC6A4-205ENST00000579221 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
SLC6A4-205ENST00000579221 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SLC6A4-205ENST00000579221 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SLC6A4-205ENST00000579221 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 242.5 ms