RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 LINC01558Q9Y6Z2 57 aa4.27□□□□□ -1.73
SSH2-208ENST00000579040 PSPHP1O15172 72 aa4.26□□□□□ -1.73
SSH2-208ENST00000579040 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
SSH2-208ENST00000579040 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
SSH2-208ENST00000579040 V9GYY9 64 aa4.25□□□□□ -1.73
SSH2-208ENST00000579040 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
SSH2-208ENST00000579040 MT1GP13640 62 aa4.19□□□□□ -1.74
SSH2-208ENST00000579040 A0A1B0GU69 56 aa4.18□□□□□ -1.74
SSH2-208ENST00000579040 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
SSH2-208ENST00000579040 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
SSH2-208ENST00000579040 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
SSH2-208ENST00000579040 A8MU10 97 aa4.11□□□□□ -1.75
SSH2-208ENST00000579040 MT1MQ8N339 61 aa4.11□□□□□ -1.75
SSH2-208ENST00000579040 MT1LQ93083 61 aa4.11□□□□□ -1.75
SSH2-208ENST00000579040 A6NED7 52 aa4.1□□□□□ -1.75
SSH2-208ENST00000579040 TNP1P09430 55 aa4.09□□□□□ -1.75
SSH2-208ENST00000579040 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
SSH2-208ENST00000579040 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
SSH2-208ENST00000579040 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
SSH2-208ENST00000579040 UQCR11O14957 56 aa4.04□□□□□ -1.76
SSH2-208ENST00000579040 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
SSH2-208ENST00000579040 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
SSH2-208ENST00000579040 MT4P47944 62 aa3.99□□□□□ -1.77
SSH2-208ENST00000579040 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SSH2-208ENST00000579040 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
SSH2-208ENST00000579040 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
SSH2-208ENST00000579040 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
SSH2-208ENST00000579040 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
SSH2-208ENST00000579040 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
SSH2-208ENST00000579040 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
SSH2-208ENST00000579040 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
SSH2-208ENST00000579040 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
SSH2-208ENST00000579040 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
SSH2-208ENST00000579040 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
SSH2-208ENST00000579040 K7ERS5 55 aa3.8□□□□□ -1.8
SSH2-208ENST00000579040 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
SSH2-208ENST00000579040 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
SSH2-208ENST00000579040 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
SSH2-208ENST00000579040 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
SSH2-208ENST00000579040 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
SSH2-208ENST00000579040 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
SSH2-208ENST00000579040 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SSH2-208ENST00000579040 ROMO1P60602 79 aa3.68□□□□□ -1.82
SSH2-208ENST00000579040 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
SSH2-208ENST00000579040 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
SSH2-208ENST00000579040 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
SSH2-208ENST00000579040 MT1AP04731 61 aa3.51□□□□□ -1.85
SSH2-208ENST00000579040 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
SSH2-208ENST00000579040 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
SSH2-208ENST00000579040 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SSH2-208ENST00000579040 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SSH2-208ENST00000579040 H3BS24 57 aa3.41□□□□□ -1.86
SSH2-208ENST00000579040 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
SSH2-208ENST00000579040 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
SSH2-208ENST00000579040 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
SSH2-208ENST00000579040 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SSH2-208ENST00000579040 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SSH2-208ENST00000579040 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
SSH2-208ENST00000579040 MT3P25713 68 aa3.21□□□□□ -1.9
SSH2-208ENST00000579040 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.9
SSH2-208ENST00000579040 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
SSH2-208ENST00000579040 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
SSH2-208ENST00000579040 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SSH2-208ENST00000579040 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
SSH2-208ENST00000579040 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
SSH2-208ENST00000579040 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
SSH2-208ENST00000579040 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SSH2-208ENST00000579040 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SSH2-208ENST00000579040 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SSH2-208ENST00000579040 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
SSH2-208ENST00000579040 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SSH2-208ENST00000579040 INE1O15225 51 aa2.39□□□□□ -2.03
SSH2-208ENST00000579040 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SSH2-208ENST00000579040 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SSH2-208ENST00000579040 PRM1P04553 51 aa1.95□□□□□ -2.1
SSH2-208ENST00000579040 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
SSH2-208ENST00000579040 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SSH2-208ENST00000579040 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 14.7 ms