RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
CDK5RAP3-211ENST00000578996 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
CDK5RAP3-211ENST00000578996 A8MU10 97 aa3.51□□□□□ -1.85
CDK5RAP3-211ENST00000578996 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CDK5RAP3-211ENST00000578996 A0A0D9SG42 100 aa3.48□□□□□ -1.85
CDK5RAP3-211ENST00000578996 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CDK5RAP3-211ENST00000578996 K7ERS5 55 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 MT1EP04732 61 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
CDK5RAP3-211ENST00000578996 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CDK5RAP3-211ENST00000578996 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
CDK5RAP3-211ENST00000578996 MT1GP13640 62 aa3.32□□□□□ -1.88
CDK5RAP3-211ENST00000578996 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
CDK5RAP3-211ENST00000578996 ROMO1P60602 79 aa3.29□□□□□ -1.88
CDK5RAP3-211ENST00000578996 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT4P47944 62 aa3.28□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT1LQ93083 61 aa3.26□□□□□ -1.89
CDK5RAP3-211ENST00000578996 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 TNP1P09430 55 aa3.24□□□□□ -1.89
CDK5RAP3-211ENST00000578996 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
CDK5RAP3-211ENST00000578996 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
CDK5RAP3-211ENST00000578996 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
CDK5RAP3-211ENST00000578996 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
CDK5RAP3-211ENST00000578996 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
CDK5RAP3-211ENST00000578996 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CDK5RAP3-211ENST00000578996 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CDK5RAP3-211ENST00000578996 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CDK5RAP3-211ENST00000578996 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
CDK5RAP3-211ENST00000578996 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
CDK5RAP3-211ENST00000578996 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CDK5RAP3-211ENST00000578996 MT1AP04731 61 aa2.77□□□□□ -1.97
CDK5RAP3-211ENST00000578996 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
CDK5RAP3-211ENST00000578996 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CDK5RAP3-211ENST00000578996 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CDK5RAP3-211ENST00000578996 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
CDK5RAP3-211ENST00000578996 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CDK5RAP3-211ENST00000578996 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
CDK5RAP3-211ENST00000578996 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CDK5RAP3-211ENST00000578996 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 NDUFAF8A1L188 74 aa2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 MUC5ACP98088 5654 aa2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 MT3P25713 68 aa2.55□□□□□ -2
CDK5RAP3-211ENST00000578996 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CDK5RAP3-211ENST00000578996 H3BS24 57 aa2.51□□□□□ -2.01
CDK5RAP3-211ENST00000578996 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
CDK5RAP3-211ENST00000578996 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
CDK5RAP3-211ENST00000578996 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
CDK5RAP3-211ENST00000578996 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
CDK5RAP3-211ENST00000578996 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
CDK5RAP3-211ENST00000578996 INE1O15225 51 aa2.24□□□□□ -2.05
CDK5RAP3-211ENST00000578996 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CDK5RAP3-211ENST00000578996 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
CDK5RAP3-211ENST00000578996 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
CDK5RAP3-211ENST00000578996 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
CDK5RAP3-211ENST00000578996 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
CDK5RAP3-211ENST00000578996 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CDK5RAP3-211ENST00000578996 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CDK5RAP3-211ENST00000578996 PRM1P04553 51 aa1.68□□□□□ -2.14
CDK5RAP3-211ENST00000578996 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
CDK5RAP3-211ENST00000578996 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CDK5RAP3-211ENST00000578996 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 83.4 ms