RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
UBB-208ENST00000578706 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
UBB-208ENST00000578706 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
UBB-208ENST00000578706 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
UBB-208ENST00000578706 KRTAP19-8Q3LI54 63 aa2.76□□□□□ -1.97
UBB-208ENST00000578706 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
UBB-208ENST00000578706 CRIPTQ9P021 101 aa2.75□□□□□ -1.97
UBB-208ENST00000578706 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
UBB-208ENST00000578706 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
UBB-208ENST00000578706 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
UBB-208ENST00000578706 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
UBB-208ENST00000578706 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
UBB-208ENST00000578706 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
UBB-208ENST00000578706 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
UBB-208ENST00000578706 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
UBB-208ENST00000578706 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
UBB-208ENST00000578706 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
UBB-208ENST00000578706 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
UBB-208ENST00000578706 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
UBB-208ENST00000578706 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
UBB-208ENST00000578706 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
UBB-208ENST00000578706 PLAC4Q8WY50 150 aa2.58□□□□□ -2
UBB-208ENST00000578706 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
UBB-208ENST00000578706 MT1XP80297 61 aa2.57□□□□□ -2
UBB-208ENST00000578706 MT4P47944 62 aa2.55□□□□□ -2
UBB-208ENST00000578706 LUZP6Q538Z0 58 aa2.55□□□□□ -2
UBB-208ENST00000578706 PP632Q6XCG6 107 aa2.55□□□□□ -2
UBB-208ENST00000578706 TNP1P09430 55 aa2.53□□□□□ -2
UBB-208ENST00000578706 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
UBB-208ENST00000578706 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
UBB-208ENST00000578706 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
UBB-208ENST00000578706 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
UBB-208ENST00000578706 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
UBB-208ENST00000578706 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
UBB-208ENST00000578706 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
UBB-208ENST00000578706 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
UBB-208ENST00000578706 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
UBB-208ENST00000578706 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
UBB-208ENST00000578706 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
UBB-208ENST00000578706 MT1EP04732 61 aa2.3□□□□□ -2.04
UBB-208ENST00000578706 MT3P25713 68 aa2.29□□□□□ -2.04
UBB-208ENST00000578706 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
UBB-208ENST00000578706 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
UBB-208ENST00000578706 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
UBB-208ENST00000578706 INE1O15225 51 aa2.27□□□□□ -2.05
UBB-208ENST00000578706 MT1GP13640 62 aa2.27□□□□□ -2.05
UBB-208ENST00000578706 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
UBB-208ENST00000578706 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
UBB-208ENST00000578706 MT1MQ8N339 61 aa2.22□□□□□ -2.05
UBB-208ENST00000578706 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
UBB-208ENST00000578706 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
UBB-208ENST00000578706 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
UBB-208ENST00000578706 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.07
UBB-208ENST00000578706 MT1LQ93083 61 aa2.14□□□□□ -2.07
UBB-208ENST00000578706 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
UBB-208ENST00000578706 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
UBB-208ENST00000578706 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
UBB-208ENST00000578706 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
UBB-208ENST00000578706 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
UBB-208ENST00000578706 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
UBB-208ENST00000578706 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
UBB-208ENST00000578706 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
UBB-208ENST00000578706 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
UBB-208ENST00000578706 MT1AP04731 61 aa1.82□□□□□ -2.12
UBB-208ENST00000578706 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
UBB-208ENST00000578706 LCE1EQ5T753 118 aa1.74□□□□□ -2.13
UBB-208ENST00000578706 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
UBB-208ENST00000578706 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
UBB-208ENST00000578706 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
UBB-208ENST00000578706 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
UBB-208ENST00000578706 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
UBB-208ENST00000578706 PRM1P04553 51 aa1.44□□□□□ -2.18
UBB-208ENST00000578706 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
UBB-208ENST00000578706 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
UBB-208ENST00000578706 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
UBB-208ENST00000578706 KRTAP4-4Q9BYR3 166 aa1.19□□□□□ -2.22
UBB-208ENST00000578706 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
UBB-208ENST00000578706 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 26.3 ms