RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 A6NED7 52 aa2.86□□□□□ -1.95
CDK5RAP3-209ENST00000578663 A0A0D9SG42 100 aa2.85□□□□□ -1.95
CDK5RAP3-209ENST00000578663 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
CDK5RAP3-209ENST00000578663 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
CDK5RAP3-209ENST00000578663 KRTAP10-7P60409 375 aaPredicted RBP2.83□□□□□ -1.96
CDK5RAP3-209ENST00000578663 A8MU10 97 aa2.82□□□□□ -1.96
CDK5RAP3-209ENST00000578663 UQCR11O14957 56 aa2.82□□□□□ -1.96
CDK5RAP3-209ENST00000578663 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
CDK5RAP3-209ENST00000578663 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
CDK5RAP3-209ENST00000578663 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
CDK5RAP3-209ENST00000578663 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
CDK5RAP3-209ENST00000578663 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
CDK5RAP3-209ENST00000578663 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
CDK5RAP3-209ENST00000578663 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
CDK5RAP3-209ENST00000578663 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
CDK5RAP3-209ENST00000578663 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
CDK5RAP3-209ENST00000578663 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
CDK5RAP3-209ENST00000578663 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
CDK5RAP3-209ENST00000578663 K7ERS5 55 aa2.7□□□□□ -1.98
CDK5RAP3-209ENST00000578663 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
CDK5RAP3-209ENST00000578663 MT1EP04732 61 aa2.68□□□□□ -1.98
CDK5RAP3-209ENST00000578663 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
CDK5RAP3-209ENST00000578663 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
CDK5RAP3-209ENST00000578663 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CDK5RAP3-209ENST00000578663 MT1GP13640 62 aa2.64□□□□□ -1.99
CDK5RAP3-209ENST00000578663 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
CDK5RAP3-209ENST00000578663 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
CDK5RAP3-209ENST00000578663 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
CDK5RAP3-209ENST00000578663 TNP1P09430 55 aa2.59□□□□□ -1.99
CDK5RAP3-209ENST00000578663 MT1MQ8N339 61 aa2.58□□□□□ -2
CDK5RAP3-209ENST00000578663 ROMO1P60602 79 aa2.56□□□□□ -2
CDK5RAP3-209ENST00000578663 LCE3AQ5TA76 89 aa2.55□□□□□ -2
CDK5RAP3-209ENST00000578663 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CDK5RAP3-209ENST00000578663 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
CDK5RAP3-209ENST00000578663 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
CDK5RAP3-209ENST00000578663 MT1LQ93083 61 aa2.51□□□□□ -2.01
CDK5RAP3-209ENST00000578663 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
CDK5RAP3-209ENST00000578663 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
CDK5RAP3-209ENST00000578663 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
CDK5RAP3-209ENST00000578663 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
CDK5RAP3-209ENST00000578663 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
CDK5RAP3-209ENST00000578663 KRTAP23-1A1A580 65 aa2.43□□□□□ -2.02
CDK5RAP3-209ENST00000578663 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
CDK5RAP3-209ENST00000578663 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
CDK5RAP3-209ENST00000578663 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CDK5RAP3-209ENST00000578663 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
CDK5RAP3-209ENST00000578663 KRTAP15-1Q3LI76 137 aa2.33□□□□□ -2.04
CDK5RAP3-209ENST00000578663 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
CDK5RAP3-209ENST00000578663 KRTAP19-4Q3LI73 84 aa2.24□□□□□ -2.05
CDK5RAP3-209ENST00000578663 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
CDK5RAP3-209ENST00000578663 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
CDK5RAP3-209ENST00000578663 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
CDK5RAP3-209ENST00000578663 MT1AP04731 61 aa2.13□□□□□ -2.07
CDK5RAP3-209ENST00000578663 KRTAP9-4Q9BYQ2 154 aa2.13□□□□□ -2.07
CDK5RAP3-209ENST00000578663 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
CDK5RAP3-209ENST00000578663 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
CDK5RAP3-209ENST00000578663 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
CDK5RAP3-209ENST00000578663 NDUFAF8A1L188 74 aa2.04□□□□□ -2.08
CDK5RAP3-209ENST00000578663 MT3P25713 68 aa1.97□□□□□ -2.09
CDK5RAP3-209ENST00000578663 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CDK5RAP3-209ENST00000578663 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
CDK5RAP3-209ENST00000578663 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
CDK5RAP3-209ENST00000578663 H3BS24 57 aa1.89□□□□□ -2.11
CDK5RAP3-209ENST00000578663 A0A0A0MQY5 61 aa1.86□□□□□ -2.11
CDK5RAP3-209ENST00000578663 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
CDK5RAP3-209ENST00000578663 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
CDK5RAP3-209ENST00000578663 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
CDK5RAP3-209ENST00000578663 INE1O15225 51 aa1.73□□□□□ -2.13
CDK5RAP3-209ENST00000578663 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
CDK5RAP3-209ENST00000578663 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
CDK5RAP3-209ENST00000578663 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
CDK5RAP3-209ENST00000578663 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
CDK5RAP3-209ENST00000578663 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CDK5RAP3-209ENST00000578663 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CDK5RAP3-209ENST00000578663 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
CDK5RAP3-209ENST00000578663 PRM1P04553 51 aa1.32□□□□□ -2.2
CDK5RAP3-209ENST00000578663 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
CDK5RAP3-209ENST00000578663 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms