RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
SRSF1-202ENST00000578430 TNP1P09430 55 aa5.42□□□□□ -1.54
SRSF1-202ENST00000578430 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SRSF1-202ENST00000578430 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
SRSF1-202ENST00000578430 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
SRSF1-202ENST00000578430 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
SRSF1-202ENST00000578430 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
SRSF1-202ENST00000578430 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
SRSF1-202ENST00000578430 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
SRSF1-202ENST00000578430 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
SRSF1-202ENST00000578430 KMT2DO14686 5537 aa5.19□□□□□ -1.58
SRSF1-202ENST00000578430 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
SRSF1-202ENST00000578430 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
SRSF1-202ENST00000578430 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
SRSF1-202ENST00000578430 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
SRSF1-202ENST00000578430 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
SRSF1-202ENST00000578430 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SRSF1-202ENST00000578430 SPRR2EP22531 72 aa4.99□□□□□ -1.61
SRSF1-202ENST00000578430 SPRR2BP35325 72 aa4.99□□□□□ -1.61
SRSF1-202ENST00000578430 SPRR2AP35326 72 aa4.99□□□□□ -1.61
SRSF1-202ENST00000578430 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
SRSF1-202ENST00000578430 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
SRSF1-202ENST00000578430 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
SRSF1-202ENST00000578430 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
SRSF1-202ENST00000578430 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SRSF1-202ENST00000578430 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
SRSF1-202ENST00000578430 MT1EP04732 61 aa4.91□□□□□ -1.62
SRSF1-202ENST00000578430 SPRR2DP22532 72 aa4.83□□□□□ -1.64
SRSF1-202ENST00000578430 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
SRSF1-202ENST00000578430 MT1LQ93083 61 aa4.79□□□□□ -1.64
SRSF1-202ENST00000578430 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
SRSF1-202ENST00000578430 MT1GP13640 62 aa4.74□□□□□ -1.65
SRSF1-202ENST00000578430 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
SRSF1-202ENST00000578430 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
SRSF1-202ENST00000578430 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
SRSF1-202ENST00000578430 MT1MQ8N339 61 aa4.63□□□□□ -1.67
SRSF1-202ENST00000578430 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
SRSF1-202ENST00000578430 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
SRSF1-202ENST00000578430 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SRSF1-202ENST00000578430 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
SRSF1-202ENST00000578430 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SRSF1-202ENST00000578430 MT3P25713 68 aa4.32□□□□□ -1.72
SRSF1-202ENST00000578430 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
SRSF1-202ENST00000578430 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
SRSF1-202ENST00000578430 MT4P47944 62 aa4.27□□□□□ -1.73
SRSF1-202ENST00000578430 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
SRSF1-202ENST00000578430 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SRSF1-202ENST00000578430 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
SRSF1-202ENST00000578430 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SRSF1-202ENST00000578430 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
SRSF1-202ENST00000578430 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
SRSF1-202ENST00000578430 MT1AP04731 61 aa4.1□□□□□ -1.75
SRSF1-202ENST00000578430 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
SRSF1-202ENST00000578430 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
SRSF1-202ENST00000578430 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SRSF1-202ENST00000578430 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
SRSF1-202ENST00000578430 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SRSF1-202ENST00000578430 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
SRSF1-202ENST00000578430 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
SRSF1-202ENST00000578430 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
SRSF1-202ENST00000578430 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SRSF1-202ENST00000578430 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SRSF1-202ENST00000578430 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
SRSF1-202ENST00000578430 AHNAKQ09666 5890 aaKnown RBP3.53□□□□□ -1.84
SRSF1-202ENST00000578430 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
SRSF1-202ENST00000578430 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SRSF1-202ENST00000578430 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
SRSF1-202ENST00000578430 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
SRSF1-202ENST00000578430 INE1O15225 51 aa3.38□□□□□ -1.87
SRSF1-202ENST00000578430 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SRSF1-202ENST00000578430 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SRSF1-202ENST00000578430 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SRSF1-202ENST00000578430 PRM1P04553 51 aa2.82□□□□□ -1.96
SRSF1-202ENST00000578430 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SRSF1-202ENST00000578430 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SRSF1-202ENST00000578430 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SRSF1-202ENST00000578430 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SRSF1-202ENST00000578430 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 55 ms