RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
TOP2A-204ENST00000578412 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
TOP2A-204ENST00000578412 SVBPQ8N300 66 aa1.45□□□□□ -2.18
TOP2A-204ENST00000578412 TMEM218A2RU14 115 aa1.44□□□□□ -2.18
TOP2A-204ENST00000578412 HSD52Q0P140 79 aa1.44□□□□□ -2.18
TOP2A-204ENST00000578412 H0YGX0 51 aa1.43□□□□□ -2.18
TOP2A-204ENST00000578412 MUSTN1Q8IVN3 82 aa1.43□□□□□ -2.18
TOP2A-204ENST00000578412 SPTSSBQ8NFR3 76 aa1.43□□□□□ -2.18
TOP2A-204ENST00000578412 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
TOP2A-204ENST00000578412 PMCHL2Q9BQD1 86 aa1.42□□□□□ -2.18
TOP2A-204ENST00000578412 M0R143 59 aa1.39□□□□□ -2.19
TOP2A-204ENST00000578412 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
TOP2A-204ENST00000578412 MRPL34Q9BQ48 92 aaKnown RBP1.39□□□□□ -2.19
TOP2A-204ENST00000578412 HCG22E2RYF7 251 aa1.38□□□□□ -2.19
TOP2A-204ENST00000578412 H0YAA0 97 aa1.38□□□□□ -2.19
TOP2A-204ENST00000578412 ATP5EP56381 51 aaPredicted RBP1.38□□□□□ -2.19
TOP2A-204ENST00000578412 MT1GP13640 62 aa1.37□□□□□ -2.19
TOP2A-204ENST00000578412 C20orf197Q8N268 126 aa1.37□□□□□ -2.19
TOP2A-204ENST00000578412 LINC00208Q96KT6 92 aa1.37□□□□□ -2.19
TOP2A-204ENST00000578412 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
TOP2A-204ENST00000578412 SYS1-DBNDD2H3BUS1 97 aa1.36□□□□□ -2.19
TOP2A-204ENST00000578412 NDUFC1O43677 76 aa1.36□□□□□ -2.19
TOP2A-204ENST00000578412 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
TOP2A-204ENST00000578412 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
TOP2A-204ENST00000578412 A0A1W2PPM0 123 aa1.33□□□□□ -2.2
TOP2A-204ENST00000578412 M0QZ58 72 aa1.32□□□□□ -2.2
TOP2A-204ENST00000578412 NREPQ16612 68 aa1.32□□□□□ -2.2
TOP2A-204ENST00000578412 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
TOP2A-204ENST00000578412 COL5A1-AS1Q5SY13 56 aa1.32□□□□□ -2.2
TOP2A-204ENST00000578412 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
TOP2A-204ENST00000578412 MT1EP04732 61 aa1.31□□□□□ -2.2
TOP2A-204ENST00000578412 COX6CP09669 75 aa1.31□□□□□ -2.2
TOP2A-204ENST00000578412 KRTDAPP60985 99 aa1.31□□□□□ -2.2
TOP2A-204ENST00000578412 KRTAP19-7Q3SYF9 63 aa1.29□□□□□ -2.2
TOP2A-204ENST00000578412 APOC3P02656 99 aa1.28□□□□□ -2.2
TOP2A-204ENST00000578412 MT-ATP8P03928 68 aa1.28□□□□□ -2.2
TOP2A-204ENST00000578412 MT1MQ8N339 61 aa1.28□□□□□ -2.2
TOP2A-204ENST00000578412 PRO1854Q9UHT4 67 aa1.28□□□□□ -2.2
TOP2A-204ENST00000578412 ACYP1P07311 99 aa1.26□□□□□ -2.21
TOP2A-204ENST00000578412 TP53AIP1Q9HCN2 124 aa1.26□□□□□ -2.21
TOP2A-204ENST00000578412 UQCR10Q9UDW1 63 aa1.25□□□□□ -2.21
TOP2A-204ENST00000578412 CHKB-CPT1BH3BT56 60 aa1.24□□□□□ -2.21
TOP2A-204ENST00000578412 VAMP8Q9BV40 100 aa1.24□□□□□ -2.21
TOP2A-204ENST00000578412 A0A087WVE0 104 aa1.23□□□□□ -2.21
TOP2A-204ENST00000578412 ACYP2P14621 99 aa1.22□□□□□ -2.21
TOP2A-204ENST00000578412 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
TOP2A-204ENST00000578412 MT1LQ93083 61 aa1.22□□□□□ -2.21
TOP2A-204ENST00000578412 HIGD1BQ9P298 99 aa1.22□□□□□ -2.21
TOP2A-204ENST00000578412 TRAV22A0A0B4J277 110 aa1.21□□□□□ -2.22
TOP2A-204ENST00000578412 A0A0D9SG42 100 aa1.2□□□□□ -2.22
TOP2A-204ENST00000578412 ATOX1O00244 68 aa1.2□□□□□ -2.22
TOP2A-204ENST00000578412 COX8AP10176 69 aa1.2□□□□□ -2.22
TOP2A-204ENST00000578412 ATXN8Q156A1 80 aa1.18□□□□□ -2.22
TOP2A-204ENST00000578412 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
TOP2A-204ENST00000578412 UQCR11O14957 56 aa1.17□□□□□ -2.22
TOP2A-204ENST00000578412 SERP2Q8N6R1 65 aa1.17□□□□□ -2.22
TOP2A-204ENST00000578412 K7EP34 96 aa1.16□□□□□ -2.22
TOP2A-204ENST00000578412 LINC01558Q9Y6Z2 57 aa1.16□□□□□ -2.22
TOP2A-204ENST00000578412 PRR15LQ9BU68 103 aa1.14□□□□□ -2.23
TOP2A-204ENST00000578412 UBL5Q9BZL1 73 aa1.13□□□□□ -2.23
TOP2A-204ENST00000578412 H7BZZ5 65 aa1.12□□□□□ -2.23
TOP2A-204ENST00000578412 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
TOP2A-204ENST00000578412 PYY3Q5JQD4 70 aa1.11□□□□□ -2.23
TOP2A-204ENST00000578412 H0Y9P7 68 aa1.07□□□□□ -2.24
TOP2A-204ENST00000578412 SPCS1Q9Y6A9 102 aa1.07□□□□□ -2.24
TOP2A-204ENST00000578412 TNP1P09430 55 aa1.06□□□□□ -2.24
TOP2A-204ENST00000578412 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
TOP2A-204ENST00000578412 MT1AP04731 61 aa1.05□□□□□ -2.24
TOP2A-204ENST00000578412 ETDBQ3ZM63 59 aa1.03□□□□□ -2.24
TOP2A-204ENST00000578412 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
TOP2A-204ENST00000578412 SPATA8Q6RVD6 105 aa0.97□□□□□ -2.25
TOP2A-204ENST00000578412 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
TOP2A-204ENST00000578412 ATP5EP2Q5VTU8 51 aa0.94□□□□□ -2.26
TOP2A-204ENST00000578412 LINC00643Q86TS7 51 aa0.94□□□□□ -2.26
TOP2A-204ENST00000578412 A0A1B0GU69 56 aa0.91□□□□□ -2.26
TOP2A-204ENST00000578412 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
TOP2A-204ENST00000578412 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
TOP2A-204ENST00000578412 PRM1P04553 51 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 79 ms