RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SPRR2AP35326 72 aa1.75□□□□□ -2.13
PTPRM-206ENST00000578093 H1FX-AS1Q4G0G2 97 aa1.75□□□□□ -2.13
PTPRM-206ENST00000578093 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
PTPRM-206ENST00000578093 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
PTPRM-206ENST00000578093 COA5Q86WW8 74 aa1.74□□□□□ -2.13
PTPRM-206ENST00000578093 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
PTPRM-206ENST00000578093 H0Y9P7 68 aa1.73□□□□□ -2.13
PTPRM-206ENST00000578093 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
PTPRM-206ENST00000578093 C8orf17Q9NRJ1 99 aa1.73□□□□□ -2.13
PTPRM-206ENST00000578093 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
PTPRM-206ENST00000578093 ROMO1P60602 79 aa1.71□□□□□ -2.14
PTPRM-206ENST00000578093 KRTAP2-1Q9BYU5 128 aa1.71□□□□□ -2.14
PTPRM-206ENST00000578093 MMP24-AS1A0A0U1RRL7 71 aa1.7□□□□□ -2.14
PTPRM-206ENST00000578093 CSAG1Q6PB30 78 aa1.7□□□□□ -2.14
PTPRM-206ENST00000578093 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
PTPRM-206ENST00000578093 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
PTPRM-206ENST00000578093 Q5W150 140 aa1.69□□□□□ -2.14
PTPRM-206ENST00000578093 ADM2Q7Z4H4 148 aa1.69□□□□□ -2.14
PTPRM-206ENST00000578093 MRPL34Q9BQ48 92 aaKnown RBP1.69□□□□□ -2.14
PTPRM-206ENST00000578093 UQCR11O14957 56 aa1.68□□□□□ -2.14
PTPRM-206ENST00000578093 SPRR2DP22532 72 aa1.68□□□□□ -2.14
PTPRM-206ENST00000578093 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
PTPRM-206ENST00000578093 K7EQZ3 153 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 K7ERS5 55 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 KRTAP8-1Q8IUC2 63 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 TP53AIP1Q9HCN2 124 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 S4R3F8 94 aa1.67□□□□□ -2.14
PTPRM-206ENST00000578093 MT1XP80297 61 aa1.66□□□□□ -2.14
PTPRM-206ENST00000578093 A0A1B0GU69 56 aa1.65□□□□□ -2.15
PTPRM-206ENST00000578093 ACYP2P14621 99 aa1.65□□□□□ -2.15
PTPRM-206ENST00000578093 DMAC1Q96GE9 116 aa1.65□□□□□ -2.15
PTPRM-206ENST00000578093 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
PTPRM-206ENST00000578093 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
PTPRM-206ENST00000578093 P0C880 135 aa1.61□□□□□ -2.15
PTPRM-206ENST00000578093 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
PTPRM-206ENST00000578093 SPINT4Q6UDR6 99 aa1.59□□□□□ -2.15
PTPRM-206ENST00000578093 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
PTPRM-206ENST00000578093 H0YAA0 97 aa1.55□□□□□ -2.16
PTPRM-206ENST00000578093 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
PTPRM-206ENST00000578093 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
PTPRM-206ENST00000578093 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PTPRM-206ENST00000578093 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
PTPRM-206ENST00000578093 A0A1B0GU33 70 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 M0QZ58 72 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 MT4P47944 62 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 PP632Q6XCG6 107 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 R4GN34 69 aa1.5□□□□□ -2.17
PTPRM-206ENST00000578093 MT1EP04732 61 aa1.48□□□□□ -2.17
PTPRM-206ENST00000578093 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
PTPRM-206ENST00000578093 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
PTPRM-206ENST00000578093 MT1MQ8N339 61 aa1.42□□□□□ -2.18
PTPRM-206ENST00000578093 MT1GP13640 62 aa1.4□□□□□ -2.19
PTPRM-206ENST00000578093 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
PTPRM-206ENST00000578093 KRTAP13-4Q3LI77 160 aa1.39□□□□□ -2.19
PTPRM-206ENST00000578093 C10orf95Q9H7T3 257 aa1.39□□□□□ -2.19
PTPRM-206ENST00000578093 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
PTPRM-206ENST00000578093 MT1LQ93083 61 aa1.38□□□□□ -2.19
PTPRM-206ENST00000578093 INE1O15225 51 aa1.37□□□□□ -2.19
PTPRM-206ENST00000578093 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
PTPRM-206ENST00000578093 A0A0D9SG42 100 aa1.36□□□□□ -2.19
PTPRM-206ENST00000578093 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PTPRM-206ENST00000578093 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
PTPRM-206ENST00000578093 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
PTPRM-206ENST00000578093 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
PTPRM-206ENST00000578093 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
PTPRM-206ENST00000578093 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
PTPRM-206ENST00000578093 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
PTPRM-206ENST00000578093 TNP1P09430 55 aa1.2□□□□□ -2.22
PTPRM-206ENST00000578093 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
PTPRM-206ENST00000578093 MT1AP04731 61 aa1.17□□□□□ -2.22
PTPRM-206ENST00000578093 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
PTPRM-206ENST00000578093 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
PTPRM-206ENST00000578093 PRM1P04553 51 aa0.8□□□□□ -2.28
PTPRM-206ENST00000578093 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
PTPRM-206ENST00000578093 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 40.5 ms