RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 NBPF19A0A087WUL8 3843 aa1.32□□□□□ -2.2
CDH8-205ENST00000577730 LCE2CQ5TA81 110 aa1.31□□□□□ -2.2
CDH8-205ENST00000577730 BSNQ9UPA5 3926 aa1.31□□□□□ -2.2
CDH8-205ENST00000577730 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
CDH8-205ENST00000577730 KRTAP9-3Q9BYQ3 159 aa1.29□□□□□ -2.2
CDH8-205ENST00000577730 DNAH6Q9C0G6 4158 aa1.29□□□□□ -2.2
CDH8-205ENST00000577730 KRTAP4-9Q9BYQ8 210 aa1.29□□□□□ -2.2
CDH8-205ENST00000577730 CSMD2Q7Z408 3487 aa1.28□□□□□ -2.2
CDH8-205ENST00000577730 KRTAP19-2Q3LHN2 52 aa1.28□□□□□ -2.2
CDH8-205ENST00000577730 MUC17Q685J3 4493 aa1.28□□□□□ -2.2
CDH8-205ENST00000577730 TRRAPQ9Y4A5 3859 aa1.27□□□□□ -2.21
CDH8-205ENST00000577730 KRTAP9-6A8MVA2 160 aa1.27□□□□□ -2.21
CDH8-205ENST00000577730 MT1MQ8N339 61 aa1.27□□□□□ -2.21
CDH8-205ENST00000577730 MT1AP04731 61 aa1.27□□□□□ -2.21
CDH8-205ENST00000577730 VPS13CQ709C8 3753 aa1.27□□□□□ -2.21
CDH8-205ENST00000577730 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
CDH8-205ENST00000577730 LYSTQ99698 3801 aa1.25□□□□□ -2.21
CDH8-205ENST00000577730 KRTAP9-7A8MTY7 169 aa1.25□□□□□ -2.21
CDH8-205ENST00000577730 SPRR2AP35326 72 aa1.25□□□□□ -2.21
CDH8-205ENST00000577730 LRP2P98164 4655 aa1.25□□□□□ -2.21
CDH8-205ENST00000577730 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
CDH8-205ENST00000577730 PKD1P98161 4303 aa1.24□□□□□ -2.21
CDH8-205ENST00000577730 KRTAP19-7Q3SYF9 63 aa1.24□□□□□ -2.21
CDH8-205ENST00000577730 DNAH7Q8WXX0 4024 aa1.23□□□□□ -2.21
CDH8-205ENST00000577730 KRTAP4-3Q9BYR4 195 aa1.22□□□□□ -2.21
CDH8-205ENST00000577730 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
CDH8-205ENST00000577730 LCE1AQ5T7P2 110 aa1.22□□□□□ -2.21
CDH8-205ENST00000577730 SPRR2EP22531 72 aa1.22□□□□□ -2.21
CDH8-205ENST00000577730 SPRR2BP35325 72 aa1.22□□□□□ -2.21
CDH8-205ENST00000577730 ANK2Q01484 3957 aa1.22□□□□□ -2.21
CDH8-205ENST00000577730 HECTD4Q9Y4D8 3996 aa1.21□□□□□ -2.22
CDH8-205ENST00000577730 CSMD3Q7Z407 3707 aa1.21□□□□□ -2.22
CDH8-205ENST00000577730 KRTAP2-2Q9BYT5 123 aa1.21□□□□□ -2.22
CDH8-205ENST00000577730 ZNF469Q96JG9 3925 aaPredicted RBP1.21□□□□□ -2.22
CDH8-205ENST00000577730 NEBP20929 6669 aa1.19□□□□□ -2.22
CDH8-205ENST00000577730 FRAS1Q86XX4 4008 aa1.19□□□□□ -2.22
CDH8-205ENST00000577730 SPRR2DP22532 72 aa1.19□□□□□ -2.22
CDH8-205ENST00000577730 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
CDH8-205ENST00000577730 PRKDCP78527 4128 aaKnown RBP1.17□□□□□ -2.22
CDH8-205ENST00000577730 KRTAP4-11Q9BYQ6 195 aa1.16□□□□□ -2.22
CDH8-205ENST00000577730 PKHD1P08F94 4074 aa1.16□□□□□ -2.22
CDH8-205ENST00000577730 KRTAP5-9P26371 169 aa1.15□□□□□ -2.23
CDH8-205ENST00000577730 KMT2AQ03164 3969 aa1.15□□□□□ -2.23
CDH8-205ENST00000577730 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
CDH8-205ENST00000577730 LCE1EQ5T753 118 aa1.14□□□□□ -2.23
CDH8-205ENST00000577730 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
CDH8-205ENST00000577730 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
CDH8-205ENST00000577730 PKHD1L1Q86WI1 4243 aa1.12□□□□□ -2.23
CDH8-205ENST00000577730 OBSCNQ5VST9 7968 aa1.12□□□□□ -2.23
CDH8-205ENST00000577730 LCE1DQ5T752 114 aa1.12□□□□□ -2.23
CDH8-205ENST00000577730 LCE5AQ5TCM9 118 aa1.09□□□□□ -2.24
CDH8-205ENST00000577730 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
CDH8-205ENST00000577730 KRTAP19-6Q3LI70 58 aa1.08□□□□□ -2.24
CDH8-205ENST00000577730 LPAP08519 4548 aa1.07□□□□□ -2.24
CDH8-205ENST00000577730 TNXBP22105 4242 aa1.07□□□□□ -2.24
CDH8-205ENST00000577730 KRTAP5-5Q701N2 237 aaPredicted RBP1.04□□□□□ -2.24
CDH8-205ENST00000577730 FSIP2Q5CZC0 6907 aa1.03□□□□□ -2.24
CDH8-205ENST00000577730 MT4P47944 62 aa1.02□□□□□ -2.25
CDH8-205ENST00000577730 LCE1FQ5T754 118 aa1□□□□□ -2.25
CDH8-205ENST00000577730 SYNE2Q8WXH0 6885 aaKnown RBP1□□□□□ -2.25
CDH8-205ENST00000577730 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
CDH8-205ENST00000577730 LCE4AQ5TA78 99 aa0.99□□□□□ -2.25
CDH8-205ENST00000577730 KRTAP5-7Q6L8G8 165 aa0.99□□□□□ -2.25
CDH8-205ENST00000577730 MUC19Q7Z5P9 8384 aa0.97□□□□□ -2.25
CDH8-205ENST00000577730 KRTAP5-11Q6L8G4 156 aa0.96□□□□□ -2.26
CDH8-205ENST00000577730 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
CDH8-205ENST00000577730 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
CDH8-205ENST00000577730 KRTAP5-8O75690 187 aa0.87□□□□□ -2.27
CDH8-205ENST00000577730 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
CDH8-205ENST00000577730 DSTQ03001 7570 aaKnown RBP0.84□□□□□ -2.28
CDH8-205ENST00000577730 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
CDH8-205ENST00000577730 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.29
CDH8-205ENST00000577730 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
CDH8-205ENST00000577730 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
CDH8-205ENST00000577730 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
CDH8-205ENST00000577730 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
CDH8-205ENST00000577730 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 89.3 ms