RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
RARA-208ENST00000577646 MT1EP04732 61 aa4.57□□□□□ -1.68
RARA-208ENST00000577646 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
RARA-208ENST00000577646 ROMO1P60602 79 aa4.55□□□□□ -1.68
RARA-208ENST00000577646 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
RARA-208ENST00000577646 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
RARA-208ENST00000577646 MT1GP13640 62 aa4.48□□□□□ -1.69
RARA-208ENST00000577646 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
RARA-208ENST00000577646 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
RARA-208ENST00000577646 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
RARA-208ENST00000577646 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
RARA-208ENST00000577646 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
RARA-208ENST00000577646 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
RARA-208ENST00000577646 MT1LQ93083 61 aa4.42□□□□□ -1.7
RARA-208ENST00000577646 MT1MQ8N339 61 aa4.33□□□□□ -1.72
RARA-208ENST00000577646 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
RARA-208ENST00000577646 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
RARA-208ENST00000577646 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
RARA-208ENST00000577646 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
RARA-208ENST00000577646 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
RARA-208ENST00000577646 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
RARA-208ENST00000577646 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
RARA-208ENST00000577646 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
RARA-208ENST00000577646 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
RARA-208ENST00000577646 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
RARA-208ENST00000577646 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
RARA-208ENST00000577646 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
RARA-208ENST00000577646 MT4P47944 62 aa4.08□□□□□ -1.76
RARA-208ENST00000577646 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
RARA-208ENST00000577646 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
RARA-208ENST00000577646 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
RARA-208ENST00000577646 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
RARA-208ENST00000577646 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
RARA-208ENST00000577646 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
RARA-208ENST00000577646 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
RARA-208ENST00000577646 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
RARA-208ENST00000577646 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
RARA-208ENST00000577646 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
RARA-208ENST00000577646 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
RARA-208ENST00000577646 MT1AP04731 61 aa3.79□□□□□ -1.8
RARA-208ENST00000577646 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
RARA-208ENST00000577646 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
RARA-208ENST00000577646 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
RARA-208ENST00000577646 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
RARA-208ENST00000577646 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
RARA-208ENST00000577646 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
RARA-208ENST00000577646 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
RARA-208ENST00000577646 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
RARA-208ENST00000577646 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
RARA-208ENST00000577646 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
RARA-208ENST00000577646 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
RARA-208ENST00000577646 MT3P25713 68 aa3.48□□□□□ -1.85
RARA-208ENST00000577646 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
RARA-208ENST00000577646 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
RARA-208ENST00000577646 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
RARA-208ENST00000577646 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
RARA-208ENST00000577646 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
RARA-208ENST00000577646 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
RARA-208ENST00000577646 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
RARA-208ENST00000577646 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
RARA-208ENST00000577646 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
RARA-208ENST00000577646 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
RARA-208ENST00000577646 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
RARA-208ENST00000577646 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
RARA-208ENST00000577646 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
RARA-208ENST00000577646 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
RARA-208ENST00000577646 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
RARA-208ENST00000577646 A0A0A0MQY5 61 aa2.53□□□□□ -2
RARA-208ENST00000577646 LCE1FQ5T754 118 aa2.53□□□□□ -2
RARA-208ENST00000577646 INE1O15225 51 aa2.49□□□□□ -2.01
RARA-208ENST00000577646 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
RARA-208ENST00000577646 H3BS24 57 aa2.39□□□□□ -2.03
RARA-208ENST00000577646 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
RARA-208ENST00000577646 PRM1P04553 51 aa2.29□□□□□ -2.04
RARA-208ENST00000577646 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
RARA-208ENST00000577646 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
RARA-208ENST00000577646 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
RARA-208ENST00000577646 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 30.6 ms