RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
DHX40-204ENST00000577549 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
DHX40-204ENST00000577549 K7EQZ3 153 aa1.47□□□□□ -2.17
DHX40-204ENST00000577549 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 HTN3P15516 51 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 SPRR2EP22531 72 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 SPRR2DP22532 72 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 SPRR2BP35325 72 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 SPRR2AP35326 72 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
DHX40-204ENST00000577549 WFDC10BQ8IUB3 73 aa1.46□□□□□ -2.18
DHX40-204ENST00000577549 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
DHX40-204ENST00000577549 PRR15LQ9BU68 103 aa1.45□□□□□ -2.18
DHX40-204ENST00000577549 KCNQ1DNQ9H478 68 aa1.45□□□□□ -2.18
DHX40-204ENST00000577549 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
DHX40-204ENST00000577549 LPAP08519 4548 aa1.45□□□□□ -2.18
DHX40-204ENST00000577549 SPART-AS1P0CW21 52 aa1.44□□□□□ -2.18
DHX40-204ENST00000577549 SPRR1AP35321 89 aa1.43□□□□□ -2.18
DHX40-204ENST00000577549 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
DHX40-204ENST00000577549 NDUFB1O75438 58 aa1.43□□□□□ -2.18
DHX40-204ENST00000577549 H0Y9P7 68 aa1.42□□□□□ -2.18
DHX40-204ENST00000577549 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
DHX40-204ENST00000577549 PRLHP81277 87 aa1.41□□□□□ -2.18
DHX40-204ENST00000577549 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
DHX40-204ENST00000577549 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
DHX40-204ENST00000577549 A0A096LNI7 61 aa1.39□□□□□ -2.19
DHX40-204ENST00000577549 SPINK7P58062 85 aa1.39□□□□□ -2.19
DHX40-204ENST00000577549 SPRR1BP22528 89 aa1.37□□□□□ -2.19
DHX40-204ENST00000577549 TP53AIP1Q9HCN2 124 aa1.36□□□□□ -2.19
DHX40-204ENST00000577549 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
DHX40-204ENST00000577549 LCE1BQ5T7P3 118 aa1.35□□□□□ -2.19
DHX40-204ENST00000577549 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
DHX40-204ENST00000577549 SPATA8Q6RVD6 105 aa1.34□□□□□ -2.2
DHX40-204ENST00000577549 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.2
DHX40-204ENST00000577549 A0A0D9SG42 100 aa1.33□□□□□ -2.2
DHX40-204ENST00000577549 A0A1B0GU69 56 aa1.32□□□□□ -2.2
DHX40-204ENST00000577549 M0R2T5 61 aa1.31□□□□□ -2.2
DHX40-204ENST00000577549 MT2AP02795 61 aa1.31□□□□□ -2.2
DHX40-204ENST00000577549 SSBP3-AS1Q7Z2R9 100 aa1.31□□□□□ -2.2
DHX40-204ENST00000577549 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
DHX40-204ENST00000577549 H0YAA0 97 aa1.27□□□□□ -2.21
DHX40-204ENST00000577549 SPINK1P00995 79 aa1.26□□□□□ -2.21
DHX40-204ENST00000577549 MUC12Q9UKN1 5478 aa1.25□□□□□ -2.21
DHX40-204ENST00000577549 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
DHX40-204ENST00000577549 RPS29P62273 56 aaKnown RBP1.23□□□□□ -2.21
DHX40-204ENST00000577549 CRIPTQ9P021 101 aa1.23□□□□□ -2.21
DHX40-204ENST00000577549 MT1FP04733 61 aa1.22□□□□□ -2.21
DHX40-204ENST00000577549 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
DHX40-204ENST00000577549 COX6B2Q6YFQ2 88 aa1.2□□□□□ -2.22
DHX40-204ENST00000577549 C9orf92A6NGG3 77 aa1.19□□□□□ -2.22
DHX40-204ENST00000577549 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
DHX40-204ENST00000577549 KRTAP20-2Q3LI61 65 aa1.14□□□□□ -2.23
DHX40-204ENST00000577549 S4R3F8 94 aa1.14□□□□□ -2.23
DHX40-204ENST00000577549 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
DHX40-204ENST00000577549 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
DHX40-204ENST00000577549 MT4P47944 62 aa1.1□□□□□ -2.23
DHX40-204ENST00000577549 M0QZ58 72 aa1.08□□□□□ -2.24
DHX40-204ENST00000577549 MT1BP07438 61 aa1.03□□□□□ -2.24
DHX40-204ENST00000577549 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
DHX40-204ENST00000577549 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
DHX40-204ENST00000577549 TNP1P09430 55 aa0.97□□□□□ -2.25
DHX40-204ENST00000577549 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
DHX40-204ENST00000577549 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
DHX40-204ENST00000577549 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
DHX40-204ENST00000577549 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
DHX40-204ENST00000577549 MT1GP13640 62 aa0.92□□□□□ -2.26
DHX40-204ENST00000577549 MT1XP80297 61 aa0.87□□□□□ -2.27
DHX40-204ENST00000577549 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
DHX40-204ENST00000577549 MT1MQ8N339 61 aa0.83□□□□□ -2.28
DHX40-204ENST00000577549 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
DHX40-204ENST00000577549 MT1EP04732 61 aa0.79□□□□□ -2.28
DHX40-204ENST00000577549 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.29
DHX40-204ENST00000577549 MT1LQ93083 61 aa0.75□□□□□ -2.29
DHX40-204ENST00000577549 PRM1P04553 51 aa0.65□□□□□ -2.3
DHX40-204ENST00000577549 MT1AP04731 61 aa0.65□□□□□ -2.31
DHX40-204ENST00000577549 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
DHX40-204ENST00000577549 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
DHX40-204ENST00000577549 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 29.3 ms