RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 KRTAP2-2Q9BYT5 123 aa7.12□□□□□ -1.27
SCO1-202ENST00000577335 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
SCO1-202ENST00000577335 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
SCO1-202ENST00000577335 MT1GP13640 62 aa7.05□□□□□ -1.28
SCO1-202ENST00000577335 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
SCO1-202ENST00000577335 MT1LQ93083 61 aa6.99□□□□□ -1.29
SCO1-202ENST00000577335 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
SCO1-202ENST00000577335 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
SCO1-202ENST00000577335 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
SCO1-202ENST00000577335 MT1MQ8N339 61 aa6.89□□□□□ -1.31
SCO1-202ENST00000577335 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
SCO1-202ENST00000577335 ROMO1P60602 79 aa6.85□□□□□ -1.31
SCO1-202ENST00000577335 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
SCO1-202ENST00000577335 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.34
SCO1-202ENST00000577335 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
SCO1-202ENST00000577335 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
SCO1-202ENST00000577335 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
SCO1-202ENST00000577335 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
SCO1-202ENST00000577335 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
SCO1-202ENST00000577335 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
SCO1-202ENST00000577335 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
SCO1-202ENST00000577335 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
SCO1-202ENST00000577335 MT4P47944 62 aa6.32□□□□□ -1.4
SCO1-202ENST00000577335 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
SCO1-202ENST00000577335 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
SCO1-202ENST00000577335 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
SCO1-202ENST00000577335 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
SCO1-202ENST00000577335 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
SCO1-202ENST00000577335 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
SCO1-202ENST00000577335 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
SCO1-202ENST00000577335 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
SCO1-202ENST00000577335 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
SCO1-202ENST00000577335 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
SCO1-202ENST00000577335 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
SCO1-202ENST00000577335 MT1AP04731 61 aa5.97□□□□□ -1.45
SCO1-202ENST00000577335 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
SCO1-202ENST00000577335 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
SCO1-202ENST00000577335 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
SCO1-202ENST00000577335 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
SCO1-202ENST00000577335 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
SCO1-202ENST00000577335 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
SCO1-202ENST00000577335 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
SCO1-202ENST00000577335 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
SCO1-202ENST00000577335 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
SCO1-202ENST00000577335 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
SCO1-202ENST00000577335 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
SCO1-202ENST00000577335 MT3P25713 68 aa5.47□□□□□ -1.53
SCO1-202ENST00000577335 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
SCO1-202ENST00000577335 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
SCO1-202ENST00000577335 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
SCO1-202ENST00000577335 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
SCO1-202ENST00000577335 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
SCO1-202ENST00000577335 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
SCO1-202ENST00000577335 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
SCO1-202ENST00000577335 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
SCO1-202ENST00000577335 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
SCO1-202ENST00000577335 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
SCO1-202ENST00000577335 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
SCO1-202ENST00000577335 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
SCO1-202ENST00000577335 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SCO1-202ENST00000577335 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
SCO1-202ENST00000577335 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
SCO1-202ENST00000577335 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
SCO1-202ENST00000577335 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SCO1-202ENST00000577335 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
SCO1-202ENST00000577335 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
SCO1-202ENST00000577335 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
SCO1-202ENST00000577335 LCE1FQ5T754 118 aa4□□□□□ -1.77
SCO1-202ENST00000577335 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
SCO1-202ENST00000577335 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
SCO1-202ENST00000577335 PRM1P04553 51 aa3.48□□□□□ -1.85
SCO1-202ENST00000577335 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
SCO1-202ENST00000577335 INE1O15225 51 aa3.46□□□□□ -1.86
SCO1-202ENST00000577335 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SCO1-202ENST00000577335 H3BS24 57 aa3.38□□□□□ -1.87
SCO1-202ENST00000577335 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
SCO1-202ENST00000577335 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SCO1-202ENST00000577335 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 90.4 ms