RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
ATP2A3-215ENST00000576957 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
ATP2A3-215ENST00000576957 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
ATP2A3-215ENST00000576957 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
ATP2A3-215ENST00000576957 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
ATP2A3-215ENST00000576957 SPRR2DP22532 72 aa5.38□□□□□ -1.55
ATP2A3-215ENST00000576957 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
ATP2A3-215ENST00000576957 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
ATP2A3-215ENST00000576957 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
ATP2A3-215ENST00000576957 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
ATP2A3-215ENST00000576957 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
ATP2A3-215ENST00000576957 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
ATP2A3-215ENST00000576957 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
ATP2A3-215ENST00000576957 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
ATP2A3-215ENST00000576957 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
ATP2A3-215ENST00000576957 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
ATP2A3-215ENST00000576957 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
ATP2A3-215ENST00000576957 KRTAP19-3Q7Z4W3 81 aa4.93□□□□□ -1.62
ATP2A3-215ENST00000576957 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
ATP2A3-215ENST00000576957 MT1EP04732 61 aa4.92□□□□□ -1.62
ATP2A3-215ENST00000576957 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
ATP2A3-215ENST00000576957 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
ATP2A3-215ENST00000576957 INE1O15225 51 aa4.83□□□□□ -1.64
ATP2A3-215ENST00000576957 MT1GP13640 62 aa4.81□□□□□ -1.64
ATP2A3-215ENST00000576957 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
ATP2A3-215ENST00000576957 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
ATP2A3-215ENST00000576957 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
ATP2A3-215ENST00000576957 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
ATP2A3-215ENST00000576957 MT4P47944 62 aa4.7□□□□□ -1.66
ATP2A3-215ENST00000576957 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
ATP2A3-215ENST00000576957 MT1MQ8N339 61 aa4.7□□□□□ -1.66
ATP2A3-215ENST00000576957 MT1LQ93083 61 aa4.66□□□□□ -1.66
ATP2A3-215ENST00000576957 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
ATP2A3-215ENST00000576957 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
ATP2A3-215ENST00000576957 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
ATP2A3-215ENST00000576957 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
ATP2A3-215ENST00000576957 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
ATP2A3-215ENST00000576957 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
ATP2A3-215ENST00000576957 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
ATP2A3-215ENST00000576957 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
ATP2A3-215ENST00000576957 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
ATP2A3-215ENST00000576957 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
ATP2A3-215ENST00000576957 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
ATP2A3-215ENST00000576957 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
ATP2A3-215ENST00000576957 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
ATP2A3-215ENST00000576957 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
ATP2A3-215ENST00000576957 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
ATP2A3-215ENST00000576957 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
ATP2A3-215ENST00000576957 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
ATP2A3-215ENST00000576957 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
ATP2A3-215ENST00000576957 MT1AP04731 61 aa3.97□□□□□ -1.77
ATP2A3-215ENST00000576957 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
ATP2A3-215ENST00000576957 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
ATP2A3-215ENST00000576957 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
ATP2A3-215ENST00000576957 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
ATP2A3-215ENST00000576957 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
ATP2A3-215ENST00000576957 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
ATP2A3-215ENST00000576957 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
ATP2A3-215ENST00000576957 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
ATP2A3-215ENST00000576957 MT3P25713 68 aa3.66□□□□□ -1.82
ATP2A3-215ENST00000576957 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
ATP2A3-215ENST00000576957 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
ATP2A3-215ENST00000576957 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
ATP2A3-215ENST00000576957 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
ATP2A3-215ENST00000576957 PRM1P04553 51 aa3.33□□□□□ -1.88
ATP2A3-215ENST00000576957 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
ATP2A3-215ENST00000576957 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
ATP2A3-215ENST00000576957 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
ATP2A3-215ENST00000576957 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
ATP2A3-215ENST00000576957 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
ATP2A3-215ENST00000576957 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
ATP2A3-215ENST00000576957 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
ATP2A3-215ENST00000576957 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
ATP2A3-215ENST00000576957 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
ATP2A3-215ENST00000576957 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
ATP2A3-215ENST00000576957 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
ATP2A3-215ENST00000576957 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
ATP2A3-215ENST00000576957 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 89.9 ms