RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
NUP88-212ENST00000576708 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
NUP88-212ENST00000576708 S4R3F8 94 aa2.78□□□□□ -1.96
NUP88-212ENST00000576708 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
NUP88-212ENST00000576708 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
NUP88-212ENST00000576708 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
NUP88-212ENST00000576708 UBL5Q9BZL1 73 aa2.73□□□□□ -1.97
NUP88-212ENST00000576708 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
NUP88-212ENST00000576708 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
NUP88-212ENST00000576708 LINC00208Q96KT6 92 aa2.71□□□□□ -1.98
NUP88-212ENST00000576708 KMT2DO14686 5537 aa2.7□□□□□ -1.98
NUP88-212ENST00000576708 H0Y9P7 68 aa2.69□□□□□ -1.98
NUP88-212ENST00000576708 UQCR11O14957 56 aa2.69□□□□□ -1.98
NUP88-212ENST00000576708 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
NUP88-212ENST00000576708 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
NUP88-212ENST00000576708 R4GN34 69 aa2.68□□□□□ -1.98
NUP88-212ENST00000576708 CRIPTQ9P021 101 aa2.65□□□□□ -1.99
NUP88-212ENST00000576708 SPINT4Q6UDR6 99 aa2.63□□□□□ -1.99
NUP88-212ENST00000576708 MT1XP80297 61 aa2.62□□□□□ -1.99
NUP88-212ENST00000576708 SPRR2FQ96RM1 72 aa2.62□□□□□ -1.99
NUP88-212ENST00000576708 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
NUP88-212ENST00000576708 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
NUP88-212ENST00000576708 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
NUP88-212ENST00000576708 H0YAA0 97 aa2.6□□□□□ -1.99
NUP88-212ENST00000576708 SPRR2EP22531 72 aa2.6□□□□□ -1.99
NUP88-212ENST00000576708 SPRR2BP35325 72 aa2.6□□□□□ -1.99
NUP88-212ENST00000576708 SPRR2AP35326 72 aa2.6□□□□□ -1.99
NUP88-212ENST00000576708 COA5Q86WW8 74 aa2.59□□□□□ -1.99
NUP88-212ENST00000576708 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
NUP88-212ENST00000576708 PLAC4Q8WY50 150 aa2.56□□□□□ -2
NUP88-212ENST00000576708 A0A1B0GU69 56 aa2.52□□□□□ -2.01
NUP88-212ENST00000576708 M0QZ58 72 aa2.52□□□□□ -2.01
NUP88-212ENST00000576708 SPRR2DP22532 72 aa2.52□□□□□ -2.01
NUP88-212ENST00000576708 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
NUP88-212ENST00000576708 INE1O15225 51 aa2.49□□□□□ -2.01
NUP88-212ENST00000576708 ACYP2P14621 99 aa2.49□□□□□ -2.01
NUP88-212ENST00000576708 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
NUP88-212ENST00000576708 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
NUP88-212ENST00000576708 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
NUP88-212ENST00000576708 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
NUP88-212ENST00000576708 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
NUP88-212ENST00000576708 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
NUP88-212ENST00000576708 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.03
NUP88-212ENST00000576708 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
NUP88-212ENST00000576708 MT1EP04732 61 aa2.32□□□□□ -2.04
NUP88-212ENST00000576708 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
NUP88-212ENST00000576708 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
NUP88-212ENST00000576708 A0A0D9SG42 100 aa2.28□□□□□ -2.04
NUP88-212ENST00000576708 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
NUP88-212ENST00000576708 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
NUP88-212ENST00000576708 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
NUP88-212ENST00000576708 MT1GP13640 62 aa2.23□□□□□ -2.05
NUP88-212ENST00000576708 MT4P47944 62 aa2.23□□□□□ -2.05
NUP88-212ENST00000576708 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
NUP88-212ENST00000576708 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
NUP88-212ENST00000576708 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
NUP88-212ENST00000576708 MT1MQ8N339 61 aa2.21□□□□□ -2.06
NUP88-212ENST00000576708 MT1LQ93083 61 aa2.2□□□□□ -2.06
NUP88-212ENST00000576708 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
NUP88-212ENST00000576708 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
NUP88-212ENST00000576708 TNP1P09430 55 aa2.1□□□□□ -2.07
NUP88-212ENST00000576708 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
NUP88-212ENST00000576708 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
NUP88-212ENST00000576708 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
NUP88-212ENST00000576708 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
NUP88-212ENST00000576708 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
NUP88-212ENST00000576708 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
NUP88-212ENST00000576708 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
NUP88-212ENST00000576708 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
NUP88-212ENST00000576708 MT1AP04731 61 aa1.86□□□□□ -2.11
NUP88-212ENST00000576708 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
NUP88-212ENST00000576708 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
NUP88-212ENST00000576708 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
NUP88-212ENST00000576708 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
NUP88-212ENST00000576708 PRM1P04553 51 aa1.26□□□□□ -2.21
NUP88-212ENST00000576708 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
NUP88-212ENST00000576708 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
NUP88-212ENST00000576708 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms