RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
CLDN7-208ENST00000575313 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
CLDN7-208ENST00000575313 MT1EP04732 61 aa6.61□□□□□ -1.35
CLDN7-208ENST00000575313 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
CLDN7-208ENST00000575313 SPRR2DP22532 72 aa6.6□□□□□ -1.35
CLDN7-208ENST00000575313 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
CLDN7-208ENST00000575313 H3BS24 57 aa6.5□□□□□ -1.37
CLDN7-208ENST00000575313 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
CLDN7-208ENST00000575313 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
CLDN7-208ENST00000575313 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
CLDN7-208ENST00000575313 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
CLDN7-208ENST00000575313 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
CLDN7-208ENST00000575313 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
CLDN7-208ENST00000575313 MT1GP13640 62 aa6.39□□□□□ -1.39
CLDN7-208ENST00000575313 MT1LQ93083 61 aa6.36□□□□□ -1.39
CLDN7-208ENST00000575313 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
CLDN7-208ENST00000575313 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
CLDN7-208ENST00000575313 GPR98Q8WXG9 6306 aa6.28□□□□□ -1.4
CLDN7-208ENST00000575313 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
CLDN7-208ENST00000575313 MT1MQ8N339 61 aa6.27□□□□□ -1.41
CLDN7-208ENST00000575313 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
CLDN7-208ENST00000575313 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
CLDN7-208ENST00000575313 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CLDN7-208ENST00000575313 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
CLDN7-208ENST00000575313 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CLDN7-208ENST00000575313 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
CLDN7-208ENST00000575313 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
CLDN7-208ENST00000575313 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
CLDN7-208ENST00000575313 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
CLDN7-208ENST00000575313 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
CLDN7-208ENST00000575313 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
CLDN7-208ENST00000575313 MT4P47944 62 aa5.73□□□□□ -1.49
CLDN7-208ENST00000575313 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
CLDN7-208ENST00000575313 HMCN1Q96RW7 5635 aa5.68□□□□□ -1.5
CLDN7-208ENST00000575313 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
CLDN7-208ENST00000575313 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
CLDN7-208ENST00000575313 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
CLDN7-208ENST00000575313 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
CLDN7-208ENST00000575313 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
CLDN7-208ENST00000575313 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
CLDN7-208ENST00000575313 KRTAP20-2Q3LI61 65 aa5.45□□□□□ -1.54
CLDN7-208ENST00000575313 MT1AP04731 61 aa5.43□□□□□ -1.54
CLDN7-208ENST00000575313 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
CLDN7-208ENST00000575313 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
CLDN7-208ENST00000575313 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
CLDN7-208ENST00000575313 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CLDN7-208ENST00000575313 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
CLDN7-208ENST00000575313 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
CLDN7-208ENST00000575313 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
CLDN7-208ENST00000575313 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
CLDN7-208ENST00000575313 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CLDN7-208ENST00000575313 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
CLDN7-208ENST00000575313 MT3P25713 68 aa4.97□□□□□ -1.61
CLDN7-208ENST00000575313 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
CLDN7-208ENST00000575313 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
CLDN7-208ENST00000575313 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.64
CLDN7-208ENST00000575313 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
CLDN7-208ENST00000575313 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
CLDN7-208ENST00000575313 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
CLDN7-208ENST00000575313 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CLDN7-208ENST00000575313 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
CLDN7-208ENST00000575313 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
CLDN7-208ENST00000575313 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
CLDN7-208ENST00000575313 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
CLDN7-208ENST00000575313 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
CLDN7-208ENST00000575313 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
CLDN7-208ENST00000575313 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
CLDN7-208ENST00000575313 INE1O15225 51 aa3.99□□□□□ -1.77
CLDN7-208ENST00000575313 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CLDN7-208ENST00000575313 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
CLDN7-208ENST00000575313 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CLDN7-208ENST00000575313 PRM1P04553 51 aa3.58□□□□□ -1.84
CLDN7-208ENST00000575313 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
CLDN7-208ENST00000575313 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
CLDN7-208ENST00000575313 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CLDN7-208ENST00000575313 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
CLDN7-208ENST00000575313 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CLDN7-208ENST00000575313 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 104.6 ms