RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TNP1P09430 55 aa4.31□□□□□ -1.72
LITAF-216ENST00000574848 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
LITAF-216ENST00000574848 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
LITAF-216ENST00000574848 SPRR2EP22531 72 aa4.26□□□□□ -1.73
LITAF-216ENST00000574848 SPRR2BP35325 72 aa4.26□□□□□ -1.73
LITAF-216ENST00000574848 SPRR2AP35326 72 aa4.26□□□□□ -1.73
LITAF-216ENST00000574848 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
LITAF-216ENST00000574848 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
LITAF-216ENST00000574848 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
LITAF-216ENST00000574848 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
LITAF-216ENST00000574848 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
LITAF-216ENST00000574848 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
LITAF-216ENST00000574848 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
LITAF-216ENST00000574848 SPRR2DP22532 72 aa4.13□□□□□ -1.75
LITAF-216ENST00000574848 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
LITAF-216ENST00000574848 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
LITAF-216ENST00000574848 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
LITAF-216ENST00000574848 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
LITAF-216ENST00000574848 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
LITAF-216ENST00000574848 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
LITAF-216ENST00000574848 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
LITAF-216ENST00000574848 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
LITAF-216ENST00000574848 MT1EP04732 61 aa3.95□□□□□ -1.78
LITAF-216ENST00000574848 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
LITAF-216ENST00000574848 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
LITAF-216ENST00000574848 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
LITAF-216ENST00000574848 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
LITAF-216ENST00000574848 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
LITAF-216ENST00000574848 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.79
LITAF-216ENST00000574848 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
LITAF-216ENST00000574848 MT1GP13640 62 aa3.81□□□□□ -1.8
LITAF-216ENST00000574848 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
LITAF-216ENST00000574848 MT1LQ93083 61 aa3.77□□□□□ -1.81
LITAF-216ENST00000574848 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
LITAF-216ENST00000574848 MT1MQ8N339 61 aa3.75□□□□□ -1.81
LITAF-216ENST00000574848 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
LITAF-216ENST00000574848 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
LITAF-216ENST00000574848 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
LITAF-216ENST00000574848 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
LITAF-216ENST00000574848 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
LITAF-216ENST00000574848 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
LITAF-216ENST00000574848 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
LITAF-216ENST00000574848 MT4P47944 62 aa3.59□□□□□ -1.83
LITAF-216ENST00000574848 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
LITAF-216ENST00000574848 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
LITAF-216ENST00000574848 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
LITAF-216ENST00000574848 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
LITAF-216ENST00000574848 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
LITAF-216ENST00000574848 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
LITAF-216ENST00000574848 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
LITAF-216ENST00000574848 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
LITAF-216ENST00000574848 MT1AP04731 61 aa3.21□□□□□ -1.9
LITAF-216ENST00000574848 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
LITAF-216ENST00000574848 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
LITAF-216ENST00000574848 INE1O15225 51 aa3.14□□□□□ -1.91
LITAF-216ENST00000574848 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
LITAF-216ENST00000574848 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
LITAF-216ENST00000574848 MT3P25713 68 aa3.01□□□□□ -1.93
LITAF-216ENST00000574848 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
LITAF-216ENST00000574848 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
LITAF-216ENST00000574848 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
LITAF-216ENST00000574848 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
LITAF-216ENST00000574848 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
LITAF-216ENST00000574848 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
LITAF-216ENST00000574848 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
LITAF-216ENST00000574848 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
LITAF-216ENST00000574848 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
LITAF-216ENST00000574848 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
LITAF-216ENST00000574848 LCE1FQ5T754 118 aa2.55□□□□□ -2
LITAF-216ENST00000574848 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
LITAF-216ENST00000574848 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
LITAF-216ENST00000574848 PRM1P04553 51 aa2.38□□□□□ -2.03
LITAF-216ENST00000574848 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
LITAF-216ENST00000574848 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
LITAF-216ENST00000574848 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
LITAF-216ENST00000574848 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
LITAF-216ENST00000574848 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
LITAF-216ENST00000574848 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms