RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 hDV103S1A0JD37 113 aa2.07□□□□□ -2.08
TRIM25-208ENST00000574234 NREPQ16612 68 aa2.07□□□□□ -2.08
TRIM25-208ENST00000574234 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
TRIM25-208ENST00000574234 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
TRIM25-208ENST00000574234 LOC101927531A0A1B0GV80 90 aa2.05□□□□□ -2.08
TRIM25-208ENST00000574234 Q6ZQY7 126 aa2.05□□□□□ -2.08
TRIM25-208ENST00000574234 CRIPTQ9P021 101 aa2.05□□□□□ -2.08
TRIM25-208ENST00000574234 A0A087WSZ3 146 aa2.04□□□□□ -2.08
TRIM25-208ENST00000574234 TRAV22A0A0B4J277 110 aa2.03□□□□□ -2.08
TRIM25-208ENST00000574234 HCG22E2RYF7 251 aa2.03□□□□□ -2.08
TRIM25-208ENST00000574234 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
TRIM25-208ENST00000574234 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
TRIM25-208ENST00000574234 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
TRIM25-208ENST00000574234 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
TRIM25-208ENST00000574234 COA5Q86WW8 74 aa2□□□□□ -2.09
TRIM25-208ENST00000574234 CSAG1Q6PB30 78 aa1.99□□□□□ -2.09
TRIM25-208ENST00000574234 LINC00208Q96KT6 92 aa1.98□□□□□ -2.09
TRIM25-208ENST00000574234 LINC00472Q9H8W2 130 aa1.98□□□□□ -2.09
TRIM25-208ENST00000574234 LINC01558Q9Y6Z2 57 aa1.98□□□□□ -2.09
TRIM25-208ENST00000574234 CHKB-CPT1BH3BT56 60 aa1.97□□□□□ -2.09
TRIM25-208ENST00000574234 CASC2Q6XLA1 102 aa1.97□□□□□ -2.09
TRIM25-208ENST00000574234 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
TRIM25-208ENST00000574234 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
TRIM25-208ENST00000574234 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
TRIM25-208ENST00000574234 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
TRIM25-208ENST00000574234 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
TRIM25-208ENST00000574234 S4R3F8 94 aa1.94□□□□□ -2.1
TRIM25-208ENST00000574234 H0Y9P7 68 aa1.93□□□□□ -2.1
TRIM25-208ENST00000574234 K7EQZ3 153 aa1.93□□□□□ -2.1
TRIM25-208ENST00000574234 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
TRIM25-208ENST00000574234 MIR22HGQ0VDD5 57 aa1.92□□□□□ -2.1
TRIM25-208ENST00000574234 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
TRIM25-208ENST00000574234 PRR15LQ9BU68 103 aa1.92□□□□□ -2.1
TRIM25-208ENST00000574234 SPTSSBQ8NFR3 76 aa1.91□□□□□ -2.1
TRIM25-208ENST00000574234 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
TRIM25-208ENST00000574234 MMP24-AS1A0A0U1RRL7 71 aa1.89□□□□□ -2.11
TRIM25-208ENST00000574234 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
TRIM25-208ENST00000574234 MT1EP04732 61 aa1.88□□□□□ -2.11
TRIM25-208ENST00000574234 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
TRIM25-208ENST00000574234 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
TRIM25-208ENST00000574234 H0YAA0 97 aa1.87□□□□□ -2.11
TRIM25-208ENST00000574234 MT1GP13640 62 aa1.87□□□□□ -2.11
TRIM25-208ENST00000574234 ACYP2P14621 99 aa1.87□□□□□ -2.11
TRIM25-208ENST00000574234 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
TRIM25-208ENST00000574234 UQCR11O14957 56 aa1.86□□□□□ -2.11
TRIM25-208ENST00000574234 MRPL34Q9BQ48 92 aaKnown RBP1.86□□□□□ -2.11
TRIM25-208ENST00000574234 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
TRIM25-208ENST00000574234 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
TRIM25-208ENST00000574234 DMAC1Q96GE9 116 aa1.85□□□□□ -2.11
TRIM25-208ENST00000574234 INE1O15225 51 aa1.84□□□□□ -2.11
TRIM25-208ENST00000574234 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
TRIM25-208ENST00000574234 A0A1B0GU69 56 aa1.82□□□□□ -2.12
TRIM25-208ENST00000574234 MT1MQ8N339 61 aa1.82□□□□□ -2.12
TRIM25-208ENST00000574234 LCE3AQ5TA76 89 aa1.78□□□□□ -2.12
TRIM25-208ENST00000574234 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
TRIM25-208ENST00000574234 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
TRIM25-208ENST00000574234 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
TRIM25-208ENST00000574234 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
TRIM25-208ENST00000574234 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
TRIM25-208ENST00000574234 M0QZ58 72 aa1.72□□□□□ -2.13
TRIM25-208ENST00000574234 MT1LQ93083 61 aa1.72□□□□□ -2.13
TRIM25-208ENST00000574234 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
TRIM25-208ENST00000574234 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
TRIM25-208ENST00000574234 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
TRIM25-208ENST00000574234 A0A0D9SG42 100 aa1.6□□□□□ -2.15
TRIM25-208ENST00000574234 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
TRIM25-208ENST00000574234 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
TRIM25-208ENST00000574234 C10orf95Q9H7T3 257 aa1.5□□□□□ -2.17
TRIM25-208ENST00000574234 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
TRIM25-208ENST00000574234 MT1AP04731 61 aa1.46□□□□□ -2.18
TRIM25-208ENST00000574234 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
TRIM25-208ENST00000574234 TNP1P09430 55 aa1.39□□□□□ -2.19
TRIM25-208ENST00000574234 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
TRIM25-208ENST00000574234 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
TRIM25-208ENST00000574234 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
TRIM25-208ENST00000574234 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
TRIM25-208ENST00000574234 PRM1P04553 51 aa0.84□□□□□ -2.27
TRIM25-208ENST00000574234 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 54.7 ms