RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 SPRR2AP35326 72 aa3.73□□□□□ -1.81
NDE1-208ENST00000573694 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
NDE1-208ENST00000573694 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
NDE1-208ENST00000573694 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
NDE1-208ENST00000573694 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
NDE1-208ENST00000573694 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
NDE1-208ENST00000573694 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
NDE1-208ENST00000573694 SPRR2DP22532 72 aa3.62□□□□□ -1.83
NDE1-208ENST00000573694 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
NDE1-208ENST00000573694 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
NDE1-208ENST00000573694 LCE3BQ5TA77 95 aa3.53□□□□□ -1.84
NDE1-208ENST00000573694 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
NDE1-208ENST00000573694 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
NDE1-208ENST00000573694 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
NDE1-208ENST00000573694 MT1EP04732 61 aa3.46□□□□□ -1.86
NDE1-208ENST00000573694 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
NDE1-208ENST00000573694 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
NDE1-208ENST00000573694 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
NDE1-208ENST00000573694 MT1GP13640 62 aa3.41□□□□□ -1.86
NDE1-208ENST00000573694 MT1LQ93083 61 aa3.4□□□□□ -1.87
NDE1-208ENST00000573694 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
NDE1-208ENST00000573694 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
NDE1-208ENST00000573694 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
NDE1-208ENST00000573694 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
NDE1-208ENST00000573694 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
NDE1-208ENST00000573694 MT1MQ8N339 61 aa3.27□□□□□ -1.89
NDE1-208ENST00000573694 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
NDE1-208ENST00000573694 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
NDE1-208ENST00000573694 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
NDE1-208ENST00000573694 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
NDE1-208ENST00000573694 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
NDE1-208ENST00000573694 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
NDE1-208ENST00000573694 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
NDE1-208ENST00000573694 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
NDE1-208ENST00000573694 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
NDE1-208ENST00000573694 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
NDE1-208ENST00000573694 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
NDE1-208ENST00000573694 MT4P47944 62 aa3.14□□□□□ -1.91
NDE1-208ENST00000573694 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
NDE1-208ENST00000573694 H3BS24 57 aa3.06□□□□□ -1.92
NDE1-208ENST00000573694 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
NDE1-208ENST00000573694 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
NDE1-208ENST00000573694 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
NDE1-208ENST00000573694 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
NDE1-208ENST00000573694 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
NDE1-208ENST00000573694 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
NDE1-208ENST00000573694 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
NDE1-208ENST00000573694 MT1AP04731 61 aa2.88□□□□□ -1.95
NDE1-208ENST00000573694 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
NDE1-208ENST00000573694 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
NDE1-208ENST00000573694 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
NDE1-208ENST00000573694 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
NDE1-208ENST00000573694 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
NDE1-208ENST00000573694 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
NDE1-208ENST00000573694 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
NDE1-208ENST00000573694 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
NDE1-208ENST00000573694 MT3P25713 68 aa2.61□□□□□ -1.99
NDE1-208ENST00000573694 INE1O15225 51 aa2.6□□□□□ -1.99
NDE1-208ENST00000573694 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
NDE1-208ENST00000573694 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
NDE1-208ENST00000573694 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NDE1-208ENST00000573694 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
NDE1-208ENST00000573694 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
NDE1-208ENST00000573694 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
NDE1-208ENST00000573694 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
NDE1-208ENST00000573694 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
NDE1-208ENST00000573694 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
NDE1-208ENST00000573694 PRM1P04553 51 aa2.18□□□□□ -2.06
NDE1-208ENST00000573694 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
NDE1-208ENST00000573694 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
NDE1-208ENST00000573694 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
NDE1-208ENST00000573694 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
NDE1-208ENST00000573694 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
NDE1-208ENST00000573694 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NDE1-208ENST00000573694 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
NDE1-208ENST00000573694 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
NDE1-208ENST00000573694 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NDE1-208ENST00000573694 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 70.5 ms