RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 ROMO1P60602 79 aa4.17□□□□□ -1.74
ATP2A3-210ENST00000572116 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
ATP2A3-210ENST00000572116 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
ATP2A3-210ENST00000572116 MT1LQ93083 61 aa4.13□□□□□ -1.75
ATP2A3-210ENST00000572116 MT1GP13640 62 aa4.12□□□□□ -1.75
ATP2A3-210ENST00000572116 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
ATP2A3-210ENST00000572116 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
ATP2A3-210ENST00000572116 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
ATP2A3-210ENST00000572116 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
ATP2A3-210ENST00000572116 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
ATP2A3-210ENST00000572116 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
ATP2A3-210ENST00000572116 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
ATP2A3-210ENST00000572116 MT1MQ8N339 61 aa4.06□□□□□ -1.76
ATP2A3-210ENST00000572116 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
ATP2A3-210ENST00000572116 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
ATP2A3-210ENST00000572116 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
ATP2A3-210ENST00000572116 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
ATP2A3-210ENST00000572116 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
ATP2A3-210ENST00000572116 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
ATP2A3-210ENST00000572116 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
ATP2A3-210ENST00000572116 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
ATP2A3-210ENST00000572116 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
ATP2A3-210ENST00000572116 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
ATP2A3-210ENST00000572116 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
ATP2A3-210ENST00000572116 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
ATP2A3-210ENST00000572116 MT4P47944 62 aa3.7□□□□□ -1.82
ATP2A3-210ENST00000572116 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
ATP2A3-210ENST00000572116 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
ATP2A3-210ENST00000572116 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
ATP2A3-210ENST00000572116 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
ATP2A3-210ENST00000572116 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
ATP2A3-210ENST00000572116 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
ATP2A3-210ENST00000572116 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
ATP2A3-210ENST00000572116 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
ATP2A3-210ENST00000572116 MT1AP04731 61 aa3.52□□□□□ -1.85
ATP2A3-210ENST00000572116 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
ATP2A3-210ENST00000572116 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
ATP2A3-210ENST00000572116 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
ATP2A3-210ENST00000572116 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
ATP2A3-210ENST00000572116 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
ATP2A3-210ENST00000572116 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
ATP2A3-210ENST00000572116 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
ATP2A3-210ENST00000572116 SVIPQ8NHG7 77 aa3.4□□□□□ -1.87
ATP2A3-210ENST00000572116 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
ATP2A3-210ENST00000572116 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
ATP2A3-210ENST00000572116 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
ATP2A3-210ENST00000572116 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
ATP2A3-210ENST00000572116 MT3P25713 68 aa3.2□□□□□ -1.9
ATP2A3-210ENST00000572116 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
ATP2A3-210ENST00000572116 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
ATP2A3-210ENST00000572116 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
ATP2A3-210ENST00000572116 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
ATP2A3-210ENST00000572116 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
ATP2A3-210ENST00000572116 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
ATP2A3-210ENST00000572116 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
ATP2A3-210ENST00000572116 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
ATP2A3-210ENST00000572116 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
ATP2A3-210ENST00000572116 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
ATP2A3-210ENST00000572116 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
ATP2A3-210ENST00000572116 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
ATP2A3-210ENST00000572116 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
ATP2A3-210ENST00000572116 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
ATP2A3-210ENST00000572116 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
ATP2A3-210ENST00000572116 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
ATP2A3-210ENST00000572116 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
ATP2A3-210ENST00000572116 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
ATP2A3-210ENST00000572116 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
ATP2A3-210ENST00000572116 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
ATP2A3-210ENST00000572116 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
ATP2A3-210ENST00000572116 A0A0A0MQY5 61 aa2.23□□□□□ -2.05
ATP2A3-210ENST00000572116 INE1O15225 51 aa2.18□□□□□ -2.06
ATP2A3-210ENST00000572116 PRM1P04553 51 aa2.16□□□□□ -2.06
ATP2A3-210ENST00000572116 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
ATP2A3-210ENST00000572116 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
ATP2A3-210ENST00000572116 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
ATP2A3-210ENST00000572116 H3BS24 57 aa1.57□□□□□ -2.16
ATP2A3-210ENST00000572116 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
ATP2A3-210ENST00000572116 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 19.6 ms