RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
ATP2A3-209ENST00000571245 SPRR2DP22532 72 aa5.33□□□□□ -1.56
ATP2A3-209ENST00000571245 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
ATP2A3-209ENST00000571245 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
ATP2A3-209ENST00000571245 TNP1P09430 55 aa5.29□□□□□ -1.56
ATP2A3-209ENST00000571245 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
ATP2A3-209ENST00000571245 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
ATP2A3-209ENST00000571245 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
ATP2A3-209ENST00000571245 H3BS24 57 aa5.13□□□□□ -1.59
ATP2A3-209ENST00000571245 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
ATP2A3-209ENST00000571245 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
ATP2A3-209ENST00000571245 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
ATP2A3-209ENST00000571245 MT1EP04732 61 aa5.06□□□□□ -1.6
ATP2A3-209ENST00000571245 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
ATP2A3-209ENST00000571245 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
ATP2A3-209ENST00000571245 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
ATP2A3-209ENST00000571245 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
ATP2A3-209ENST00000571245 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
ATP2A3-209ENST00000571245 MT1GP13640 62 aa4.94□□□□□ -1.62
ATP2A3-209ENST00000571245 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
ATP2A3-209ENST00000571245 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
ATP2A3-209ENST00000571245 MT1LQ93083 61 aa4.85□□□□□ -1.63
ATP2A3-209ENST00000571245 MT1MQ8N339 61 aa4.82□□□□□ -1.64
ATP2A3-209ENST00000571245 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
ATP2A3-209ENST00000571245 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
ATP2A3-209ENST00000571245 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
ATP2A3-209ENST00000571245 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
ATP2A3-209ENST00000571245 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
ATP2A3-209ENST00000571245 MT4P47944 62 aa4.67□□□□□ -1.66
ATP2A3-209ENST00000571245 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
ATP2A3-209ENST00000571245 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
ATP2A3-209ENST00000571245 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
ATP2A3-209ENST00000571245 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
ATP2A3-209ENST00000571245 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
ATP2A3-209ENST00000571245 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
ATP2A3-209ENST00000571245 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
ATP2A3-209ENST00000571245 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
ATP2A3-209ENST00000571245 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
ATP2A3-209ENST00000571245 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
ATP2A3-209ENST00000571245 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
ATP2A3-209ENST00000571245 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
ATP2A3-209ENST00000571245 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
ATP2A3-209ENST00000571245 INE1O15225 51 aa4.3□□□□□ -1.72
ATP2A3-209ENST00000571245 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
ATP2A3-209ENST00000571245 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
ATP2A3-209ENST00000571245 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
ATP2A3-209ENST00000571245 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
ATP2A3-209ENST00000571245 MT1AP04731 61 aa4.13□□□□□ -1.75
ATP2A3-209ENST00000571245 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
ATP2A3-209ENST00000571245 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
ATP2A3-209ENST00000571245 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
ATP2A3-209ENST00000571245 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
ATP2A3-209ENST00000571245 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
ATP2A3-209ENST00000571245 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
ATP2A3-209ENST00000571245 MT3P25713 68 aa3.81□□□□□ -1.8
ATP2A3-209ENST00000571245 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
ATP2A3-209ENST00000571245 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
ATP2A3-209ENST00000571245 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
ATP2A3-209ENST00000571245 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
ATP2A3-209ENST00000571245 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
ATP2A3-209ENST00000571245 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
ATP2A3-209ENST00000571245 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
ATP2A3-209ENST00000571245 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
ATP2A3-209ENST00000571245 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
ATP2A3-209ENST00000571245 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
ATP2A3-209ENST00000571245 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
ATP2A3-209ENST00000571245 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
ATP2A3-209ENST00000571245 PRM1P04553 51 aa3.09□□□□□ -1.91
ATP2A3-209ENST00000571245 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
ATP2A3-209ENST00000571245 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
ATP2A3-209ENST00000571245 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
ATP2A3-209ENST00000571245 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
ATP2A3-209ENST00000571245 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
ATP2A3-209ENST00000571245 PHGR1C9JFL3 82 aa2.56□□□□□ -2
ATP2A3-209ENST00000571245 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
ATP2A3-209ENST00000571245 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
ATP2A3-209ENST00000571245 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
ATP2A3-209ENST00000571245 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 22.9 ms