RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
RPAIN-207ENST00000570883 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
RPAIN-207ENST00000570883 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
RPAIN-207ENST00000570883 A8MU10 97 aa5.13□□□□□ -1.59
RPAIN-207ENST00000570883 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
RPAIN-207ENST00000570883 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
RPAIN-207ENST00000570883 SPRR2DP22532 72 aa5.1□□□□□ -1.59
RPAIN-207ENST00000570883 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
RPAIN-207ENST00000570883 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
RPAIN-207ENST00000570883 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
RPAIN-207ENST00000570883 K7ERS5 55 aa5.03□□□□□ -1.6
RPAIN-207ENST00000570883 MT1EP04732 61 aa5□□□□□ -1.61
RPAIN-207ENST00000570883 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
RPAIN-207ENST00000570883 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
RPAIN-207ENST00000570883 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
RPAIN-207ENST00000570883 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
RPAIN-207ENST00000570883 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
RPAIN-207ENST00000570883 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
RPAIN-207ENST00000570883 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
RPAIN-207ENST00000570883 TNP1P09430 55 aa4.87□□□□□ -1.63
RPAIN-207ENST00000570883 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
RPAIN-207ENST00000570883 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
RPAIN-207ENST00000570883 MT1LQ93083 61 aa4.8□□□□□ -1.64
RPAIN-207ENST00000570883 MT1GP13640 62 aa4.79□□□□□ -1.64
RPAIN-207ENST00000570883 ROMO1P60602 79 aa4.77□□□□□ -1.65
RPAIN-207ENST00000570883 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
RPAIN-207ENST00000570883 MT1MQ8N339 61 aa4.76□□□□□ -1.65
RPAIN-207ENST00000570883 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
RPAIN-207ENST00000570883 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
RPAIN-207ENST00000570883 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
RPAIN-207ENST00000570883 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
RPAIN-207ENST00000570883 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
RPAIN-207ENST00000570883 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
RPAIN-207ENST00000570883 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
RPAIN-207ENST00000570883 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
RPAIN-207ENST00000570883 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
RPAIN-207ENST00000570883 MT4P47944 62 aa4.46□□□□□ -1.7
RPAIN-207ENST00000570883 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
RPAIN-207ENST00000570883 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
RPAIN-207ENST00000570883 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
RPAIN-207ENST00000570883 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
RPAIN-207ENST00000570883 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
RPAIN-207ENST00000570883 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
RPAIN-207ENST00000570883 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
RPAIN-207ENST00000570883 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
RPAIN-207ENST00000570883 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
RPAIN-207ENST00000570883 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
RPAIN-207ENST00000570883 MT1AP04731 61 aa4.08□□□□□ -1.76
RPAIN-207ENST00000570883 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
RPAIN-207ENST00000570883 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
RPAIN-207ENST00000570883 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
RPAIN-207ENST00000570883 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
RPAIN-207ENST00000570883 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
RPAIN-207ENST00000570883 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
RPAIN-207ENST00000570883 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
RPAIN-207ENST00000570883 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
RPAIN-207ENST00000570883 MT3P25713 68 aa3.69□□□□□ -1.82
RPAIN-207ENST00000570883 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
RPAIN-207ENST00000570883 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
RPAIN-207ENST00000570883 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
RPAIN-207ENST00000570883 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
RPAIN-207ENST00000570883 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
RPAIN-207ENST00000570883 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
RPAIN-207ENST00000570883 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
RPAIN-207ENST00000570883 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
RPAIN-207ENST00000570883 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
RPAIN-207ENST00000570883 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
RPAIN-207ENST00000570883 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
RPAIN-207ENST00000570883 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
RPAIN-207ENST00000570883 INE1O15225 51 aa3.08□□□□□ -1.92
RPAIN-207ENST00000570883 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RPAIN-207ENST00000570883 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
RPAIN-207ENST00000570883 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
RPAIN-207ENST00000570883 PRM1P04553 51 aa2.48□□□□□ -2.01
RPAIN-207ENST00000570883 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
RPAIN-207ENST00000570883 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
RPAIN-207ENST00000570883 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
RPAIN-207ENST00000570883 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms