RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KRTAP4-4Q9BYR3 166 aa5.16□□□□□ -1.58
CTDNEP1-205ENST00000570828 COA5Q86WW8 74 aa5.14□□□□□ -1.59
CTDNEP1-205ENST00000570828 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
CTDNEP1-205ENST00000570828 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CTDNEP1-205ENST00000570828 LINC01558Q9Y6Z2 57 aa5.13□□□□□ -1.59
CTDNEP1-205ENST00000570828 ACYP2P14621 99 aa5.1□□□□□ -1.59
CTDNEP1-205ENST00000570828 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
CTDNEP1-205ENST00000570828 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
CTDNEP1-205ENST00000570828 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
CTDNEP1-205ENST00000570828 SPRR2EP22531 72 aa5.06□□□□□ -1.6
CTDNEP1-205ENST00000570828 SPRR2BP35325 72 aa5.06□□□□□ -1.6
CTDNEP1-205ENST00000570828 SPRR2AP35326 72 aa5.06□□□□□ -1.6
CTDNEP1-205ENST00000570828 MT3P25713 68 aa5.03□□□□□ -1.6
CTDNEP1-205ENST00000570828 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
CTDNEP1-205ENST00000570828 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
CTDNEP1-205ENST00000570828 A0A1B0GU69 56 aa4.94□□□□□ -1.62
CTDNEP1-205ENST00000570828 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
CTDNEP1-205ENST00000570828 UQCR11O14957 56 aa4.91□□□□□ -1.62
CTDNEP1-205ENST00000570828 SPRR2DP22532 72 aa4.9□□□□□ -1.63
CTDNEP1-205ENST00000570828 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
CTDNEP1-205ENST00000570828 A0A1B0GU33 70 aa4.86□□□□□ -1.63
CTDNEP1-205ENST00000570828 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CTDNEP1-205ENST00000570828 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
CTDNEP1-205ENST00000570828 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
CTDNEP1-205ENST00000570828 KRTAP13-4Q3LI77 160 aa4.83□□□□□ -1.64
CTDNEP1-205ENST00000570828 A8MU10 97 aa4.82□□□□□ -1.64
CTDNEP1-205ENST00000570828 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTDNEP1-205ENST00000570828 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
CTDNEP1-205ENST00000570828 A0A0D9SG42 100 aa4.72□□□□□ -1.65
CTDNEP1-205ENST00000570828 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
CTDNEP1-205ENST00000570828 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
CTDNEP1-205ENST00000570828 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
CTDNEP1-205ENST00000570828 MT1EP04732 61 aa4.62□□□□□ -1.67
CTDNEP1-205ENST00000570828 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
CTDNEP1-205ENST00000570828 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
CTDNEP1-205ENST00000570828 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
CTDNEP1-205ENST00000570828 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
CTDNEP1-205ENST00000570828 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
CTDNEP1-205ENST00000570828 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CTDNEP1-205ENST00000570828 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
CTDNEP1-205ENST00000570828 MT1GP13640 62 aa4.47□□□□□ -1.69
CTDNEP1-205ENST00000570828 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
CTDNEP1-205ENST00000570828 TNP1P09430 55 aa4.42□□□□□ -1.7
CTDNEP1-205ENST00000570828 MT1LQ93083 61 aa4.4□□□□□ -1.71
CTDNEP1-205ENST00000570828 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
CTDNEP1-205ENST00000570828 MT1MQ8N339 61 aa4.39□□□□□ -1.71
CTDNEP1-205ENST00000570828 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CTDNEP1-205ENST00000570828 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
CTDNEP1-205ENST00000570828 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
CTDNEP1-205ENST00000570828 MT4P47944 62 aa4.28□□□□□ -1.72
CTDNEP1-205ENST00000570828 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
CTDNEP1-205ENST00000570828 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
CTDNEP1-205ENST00000570828 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
CTDNEP1-205ENST00000570828 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
CTDNEP1-205ENST00000570828 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
CTDNEP1-205ENST00000570828 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CTDNEP1-205ENST00000570828 INE1O15225 51 aa3.97□□□□□ -1.77
CTDNEP1-205ENST00000570828 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
CTDNEP1-205ENST00000570828 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CTDNEP1-205ENST00000570828 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CTDNEP1-205ENST00000570828 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
CTDNEP1-205ENST00000570828 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
CTDNEP1-205ENST00000570828 MT1AP04731 61 aa3.74□□□□□ -1.81
CTDNEP1-205ENST00000570828 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
CTDNEP1-205ENST00000570828 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
CTDNEP1-205ENST00000570828 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
CTDNEP1-205ENST00000570828 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CTDNEP1-205ENST00000570828 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CTDNEP1-205ENST00000570828 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
CTDNEP1-205ENST00000570828 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CTDNEP1-205ENST00000570828 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
CTDNEP1-205ENST00000570828 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
CTDNEP1-205ENST00000570828 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CTDNEP1-205ENST00000570828 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CTDNEP1-205ENST00000570828 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
CTDNEP1-205ENST00000570828 PRM1P04553 51 aa2.28□□□□□ -2.04
CTDNEP1-205ENST00000570828 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CTDNEP1-205ENST00000570828 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms