RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
RAB40B-203ENST00000570676 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
RAB40B-203ENST00000570676 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
RAB40B-203ENST00000570676 MT1EP04732 61 aa5.64□□□□□ -1.51
RAB40B-203ENST00000570676 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
RAB40B-203ENST00000570676 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
RAB40B-203ENST00000570676 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
RAB40B-203ENST00000570676 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
RAB40B-203ENST00000570676 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
RAB40B-203ENST00000570676 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
RAB40B-203ENST00000570676 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
RAB40B-203ENST00000570676 MT1GP13640 62 aa5.43□□□□□ -1.54
RAB40B-203ENST00000570676 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
RAB40B-203ENST00000570676 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
RAB40B-203ENST00000570676 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.54
RAB40B-203ENST00000570676 MT1MQ8N339 61 aa5.37□□□□□ -1.55
RAB40B-203ENST00000570676 MT1LQ93083 61 aa5.37□□□□□ -1.55
RAB40B-203ENST00000570676 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
RAB40B-203ENST00000570676 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
RAB40B-203ENST00000570676 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
RAB40B-203ENST00000570676 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
RAB40B-203ENST00000570676 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
RAB40B-203ENST00000570676 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
RAB40B-203ENST00000570676 MT4P47944 62 aa5.2□□□□□ -1.58
RAB40B-203ENST00000570676 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
RAB40B-203ENST00000570676 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
RAB40B-203ENST00000570676 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
RAB40B-203ENST00000570676 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
RAB40B-203ENST00000570676 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
RAB40B-203ENST00000570676 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
RAB40B-203ENST00000570676 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
RAB40B-203ENST00000570676 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
RAB40B-203ENST00000570676 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
RAB40B-203ENST00000570676 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
RAB40B-203ENST00000570676 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
RAB40B-203ENST00000570676 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
RAB40B-203ENST00000570676 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
RAB40B-203ENST00000570676 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
RAB40B-203ENST00000570676 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
RAB40B-203ENST00000570676 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
RAB40B-203ENST00000570676 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
RAB40B-203ENST00000570676 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
RAB40B-203ENST00000570676 MT1AP04731 61 aa4.57□□□□□ -1.68
RAB40B-203ENST00000570676 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
RAB40B-203ENST00000570676 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
RAB40B-203ENST00000570676 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
RAB40B-203ENST00000570676 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
RAB40B-203ENST00000570676 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
RAB40B-203ENST00000570676 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
RAB40B-203ENST00000570676 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
RAB40B-203ENST00000570676 MT3P25713 68 aa4.15□□□□□ -1.75
RAB40B-203ENST00000570676 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
RAB40B-203ENST00000570676 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
RAB40B-203ENST00000570676 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
RAB40B-203ENST00000570676 AHNAKQ09666 5890 aaKnown RBP4.13□□□□□ -1.75
RAB40B-203ENST00000570676 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
RAB40B-203ENST00000570676 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
RAB40B-203ENST00000570676 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
RAB40B-203ENST00000570676 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
RAB40B-203ENST00000570676 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
RAB40B-203ENST00000570676 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
RAB40B-203ENST00000570676 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
RAB40B-203ENST00000570676 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
RAB40B-203ENST00000570676 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
RAB40B-203ENST00000570676 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
RAB40B-203ENST00000570676 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
RAB40B-203ENST00000570676 H3BS24 57 aa3.49□□□□□ -1.85
RAB40B-203ENST00000570676 INE1O15225 51 aa3.37□□□□□ -1.87
RAB40B-203ENST00000570676 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
RAB40B-203ENST00000570676 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
RAB40B-203ENST00000570676 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
RAB40B-203ENST00000570676 PRM1P04553 51 aa3.01□□□□□ -1.93
RAB40B-203ENST00000570676 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
RAB40B-203ENST00000570676 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
RAB40B-203ENST00000570676 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
RAB40B-203ENST00000570676 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
RAB40B-203ENST00000570676 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RAB40B-203ENST00000570676 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 156.3 ms