RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 DSCR10P59022 87 aa3.01□□□□□ -1.93
LINC00556-201ENST00000569603 KRTAP12-2P59991 146 aa3□□□□□ -1.93
LINC00556-201ENST00000569603 Q8N9L7 120 aa3□□□□□ -1.93
LINC00556-201ENST00000569603 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
LINC00556-201ENST00000569603 NEBP20929 6669 aa2.96□□□□□ -1.94
LINC00556-201ENST00000569603 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
LINC00556-201ENST00000569603 KRTAP10-10P60014 251 aa2.95□□□□□ -1.94
LINC00556-201ENST00000569603 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
LINC00556-201ENST00000569603 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.95
LINC00556-201ENST00000569603 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
LINC00556-201ENST00000569603 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
LINC00556-201ENST00000569603 K7EQZ3 153 aa2.85□□□□□ -1.95
LINC00556-201ENST00000569603 WFDC13Q8IUB5 93 aa2.84□□□□□ -1.95
LINC00556-201ENST00000569603 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
LINC00556-201ENST00000569603 MMP24-AS1A0A0U1RRL7 71 aa2.82□□□□□ -1.96
LINC00556-201ENST00000569603 KMT2DO14686 5537 aa2.82□□□□□ -1.96
LINC00556-201ENST00000569603 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
LINC00556-201ENST00000569603 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
LINC00556-201ENST00000569603 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
LINC00556-201ENST00000569603 TP53AIP1Q9HCN2 124 aa2.79□□□□□ -1.96
LINC00556-201ENST00000569603 MT1BP07438 61 aa2.78□□□□□ -1.96
LINC00556-201ENST00000569603 KRTAP19-8Q3LI54 63 aa2.76□□□□□ -1.97
LINC00556-201ENST00000569603 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
LINC00556-201ENST00000569603 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
LINC00556-201ENST00000569603 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
LINC00556-201ENST00000569603 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
LINC00556-201ENST00000569603 H0YAA0 97 aa2.66□□□□□ -1.98
LINC00556-201ENST00000569603 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
LINC00556-201ENST00000569603 S4R3F8 94 aa2.65□□□□□ -1.99
LINC00556-201ENST00000569603 KRTAP13-4Q3LI77 160 aa2.63□□□□□ -1.99
LINC00556-201ENST00000569603 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
LINC00556-201ENST00000569603 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
LINC00556-201ENST00000569603 MT1XP80297 61 aa2.58□□□□□ -2
LINC00556-201ENST00000569603 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
LINC00556-201ENST00000569603 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
LINC00556-201ENST00000569603 SPRR2EP22531 72 aa2.52□□□□□ -2.01
LINC00556-201ENST00000569603 SPRR2BP35325 72 aa2.52□□□□□ -2.01
LINC00556-201ENST00000569603 SPRR2AP35326 72 aa2.52□□□□□ -2.01
LINC00556-201ENST00000569603 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
LINC00556-201ENST00000569603 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
LINC00556-201ENST00000569603 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
LINC00556-201ENST00000569603 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
LINC00556-201ENST00000569603 SPRR2DP22532 72 aa2.44□□□□□ -2.02
LINC00556-201ENST00000569603 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
LINC00556-201ENST00000569603 DSTQ03001 7570 aaKnown RBP2.42□□□□□ -2.02
LINC00556-201ENST00000569603 M0QZ58 72 aa2.39□□□□□ -2.03
LINC00556-201ENST00000569603 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
LINC00556-201ENST00000569603 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
LINC00556-201ENST00000569603 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
LINC00556-201ENST00000569603 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
LINC00556-201ENST00000569603 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
LINC00556-201ENST00000569603 MT1EP04732 61 aa2.29□□□□□ -2.04
LINC00556-201ENST00000569603 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
LINC00556-201ENST00000569603 A0A0D9SG42 100 aa2.26□□□□□ -2.05
LINC00556-201ENST00000569603 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
LINC00556-201ENST00000569603 MT1GP13640 62 aa2.2□□□□□ -2.06
LINC00556-201ENST00000569603 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
LINC00556-201ENST00000569603 MT1MQ8N339 61 aa2.18□□□□□ -2.06
LINC00556-201ENST00000569603 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
LINC00556-201ENST00000569603 MT1LQ93083 61 aa2.16□□□□□ -2.06
LINC00556-201ENST00000569603 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
LINC00556-201ENST00000569603 MT4P47944 62 aa2.14□□□□□ -2.07
LINC00556-201ENST00000569603 TNP1P09430 55 aa2.06□□□□□ -2.08
LINC00556-201ENST00000569603 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
LINC00556-201ENST00000569603 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
LINC00556-201ENST00000569603 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
LINC00556-201ENST00000569603 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
LINC00556-201ENST00000569603 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
LINC00556-201ENST00000569603 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
LINC00556-201ENST00000569603 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
LINC00556-201ENST00000569603 MT1AP04731 61 aa1.83□□□□□ -2.12
LINC00556-201ENST00000569603 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
LINC00556-201ENST00000569603 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
LINC00556-201ENST00000569603 PRM1P04553 51 aa1.53□□□□□ -2.16
LINC00556-201ENST00000569603 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
LINC00556-201ENST00000569603 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
LINC00556-201ENST00000569603 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms