RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
NME3-211ENST00000568561 MT4P47944 62 aa5.65□□□□□ -1.5
NME3-211ENST00000568561 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
NME3-211ENST00000568561 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
NME3-211ENST00000568561 A0A0D9SG42 100 aa5.62□□□□□ -1.51
NME3-211ENST00000568561 A8MU10 97 aa5.62□□□□□ -1.51
NME3-211ENST00000568561 K7ERS5 55 aa5.61□□□□□ -1.51
NME3-211ENST00000568561 MT1GP13640 62 aa5.6□□□□□ -1.51
NME3-211ENST00000568561 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
NME3-211ENST00000568561 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
NME3-211ENST00000568561 MT1MQ8N339 61 aa5.56□□□□□ -1.52
NME3-211ENST00000568561 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
NME3-211ENST00000568561 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
NME3-211ENST00000568561 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
NME3-211ENST00000568561 MT1LQ93083 61 aa5.5□□□□□ -1.53
NME3-211ENST00000568561 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
NME3-211ENST00000568561 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
NME3-211ENST00000568561 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
NME3-211ENST00000568561 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
NME3-211ENST00000568561 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
NME3-211ENST00000568561 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
NME3-211ENST00000568561 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
NME3-211ENST00000568561 ROMO1P60602 79 aa5.28□□□□□ -1.56
NME3-211ENST00000568561 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
NME3-211ENST00000568561 KRTAP5-7Q6L8G8 165 aa5.26□□□□□ -1.57
NME3-211ENST00000568561 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
NME3-211ENST00000568561 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
NME3-211ENST00000568561 TNP1P09430 55 aa5.22□□□□□ -1.57
NME3-211ENST00000568561 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
NME3-211ENST00000568561 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
NME3-211ENST00000568561 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
NME3-211ENST00000568561 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
NME3-211ENST00000568561 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
NME3-211ENST00000568561 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
NME3-211ENST00000568561 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
NME3-211ENST00000568561 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
NME3-211ENST00000568561 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
NME3-211ENST00000568561 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
NME3-211ENST00000568561 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
NME3-211ENST00000568561 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
NME3-211ENST00000568561 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
NME3-211ENST00000568561 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
NME3-211ENST00000568561 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
NME3-211ENST00000568561 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
NME3-211ENST00000568561 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
NME3-211ENST00000568561 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
NME3-211ENST00000568561 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
NME3-211ENST00000568561 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
NME3-211ENST00000568561 MT1AP04731 61 aa4.66□□□□□ -1.66
NME3-211ENST00000568561 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
NME3-211ENST00000568561 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
NME3-211ENST00000568561 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
NME3-211ENST00000568561 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
NME3-211ENST00000568561 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
NME3-211ENST00000568561 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
NME3-211ENST00000568561 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
NME3-211ENST00000568561 MT3P25713 68 aa4.26□□□□□ -1.73
NME3-211ENST00000568561 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
NME3-211ENST00000568561 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
NME3-211ENST00000568561 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
NME3-211ENST00000568561 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
NME3-211ENST00000568561 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
NME3-211ENST00000568561 H3BS24 57 aa3.77□□□□□ -1.81
NME3-211ENST00000568561 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
NME3-211ENST00000568561 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
NME3-211ENST00000568561 INE1O15225 51 aa3.43□□□□□ -1.86
NME3-211ENST00000568561 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
NME3-211ENST00000568561 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
NME3-211ENST00000568561 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
NME3-211ENST00000568561 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
NME3-211ENST00000568561 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
NME3-211ENST00000568561 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
NME3-211ENST00000568561 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
NME3-211ENST00000568561 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
NME3-211ENST00000568561 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
NME3-211ENST00000568561 PRM1P04553 51 aa2.7□□□□□ -1.98
NME3-211ENST00000568561 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
NME3-211ENST00000568561 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms