RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
CDH13-210ENST00000567445 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
CDH13-210ENST00000567445 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
CDH13-210ENST00000567445 COX7CP15954 63 aa3.72□□□□□ -1.81
CDH13-210ENST00000567445 SPRR2DP22532 72 aa3.72□□□□□ -1.81
CDH13-210ENST00000567445 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
CDH13-210ENST00000567445 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
CDH13-210ENST00000567445 A8MU10 97 aa3.67□□□□□ -1.82
CDH13-210ENST00000567445 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CDH13-210ENST00000567445 TMEM258P61165 79 aa3.66□□□□□ -1.82
CDH13-210ENST00000567445 SNURFQ9Y675 71 aa3.66□□□□□ -1.82
CDH13-210ENST00000567445 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
CDH13-210ENST00000567445 CYSTM1Q9H1C7 97 aa3.63□□□□□ -1.83
CDH13-210ENST00000567445 H7BZZ5 65 aa3.6□□□□□ -1.83
CDH13-210ENST00000567445 ACYP2P14621 99 aa3.6□□□□□ -1.83
CDH13-210ENST00000567445 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
CDH13-210ENST00000567445 ROMO1P60602 79 aa3.56□□□□□ -1.84
CDH13-210ENST00000567445 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
CDH13-210ENST00000567445 SERP1Q9Y6X1 66 aa3.53□□□□□ -1.84
CDH13-210ENST00000567445 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
CDH13-210ENST00000567445 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
CDH13-210ENST00000567445 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
CDH13-210ENST00000567445 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CDH13-210ENST00000567445 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
CDH13-210ENST00000567445 COA5Q86WW8 74 aa3.45□□□□□ -1.86
CDH13-210ENST00000567445 MT1EP04732 61 aa3.42□□□□□ -1.86
CDH13-210ENST00000567445 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
CDH13-210ENST00000567445 A0A0D9SG42 100 aa3.35□□□□□ -1.87
CDH13-210ENST00000567445 Q1T7F1 81 aa3.35□□□□□ -1.87
CDH13-210ENST00000567445 MT1GP13640 62 aa3.34□□□□□ -1.88
CDH13-210ENST00000567445 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
CDH13-210ENST00000567445 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
CDH13-210ENST00000567445 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
CDH13-210ENST00000567445 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
CDH13-210ENST00000567445 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
CDH13-210ENST00000567445 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
CDH13-210ENST00000567445 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
CDH13-210ENST00000567445 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
CDH13-210ENST00000567445 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CDH13-210ENST00000567445 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
CDH13-210ENST00000567445 MT1MQ8N339 61 aa3.27□□□□□ -1.89
CDH13-210ENST00000567445 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
CDH13-210ENST00000567445 A0A1B0GU69 56 aa3.25□□□□□ -1.89
CDH13-210ENST00000567445 MT4P47944 62 aa3.25□□□□□ -1.89
CDH13-210ENST00000567445 MT1LQ93083 61 aa3.25□□□□□ -1.89
CDH13-210ENST00000567445 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
CDH13-210ENST00000567445 PRR15LQ9BU68 103 aa3.23□□□□□ -1.89
CDH13-210ENST00000567445 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
CDH13-210ENST00000567445 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
CDH13-210ENST00000567445 TNP1P09430 55 aa3.16□□□□□ -1.9
CDH13-210ENST00000567445 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
CDH13-210ENST00000567445 UQCR11O14957 56 aa3.15□□□□□ -1.91
CDH13-210ENST00000567445 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
CDH13-210ENST00000567445 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
CDH13-210ENST00000567445 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CDH13-210ENST00000567445 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
CDH13-210ENST00000567445 INE1O15225 51 aa3.03□□□□□ -1.93
CDH13-210ENST00000567445 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.93
CDH13-210ENST00000567445 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
CDH13-210ENST00000567445 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
CDH13-210ENST00000567445 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CDH13-210ENST00000567445 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
CDH13-210ENST00000567445 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
CDH13-210ENST00000567445 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CDH13-210ENST00000567445 MT1AP04731 61 aa2.77□□□□□ -1.97
CDH13-210ENST00000567445 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CDH13-210ENST00000567445 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
CDH13-210ENST00000567445 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CDH13-210ENST00000567445 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CDH13-210ENST00000567445 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
CDH13-210ENST00000567445 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
CDH13-210ENST00000567445 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
CDH13-210ENST00000567445 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CDH13-210ENST00000567445 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CDH13-210ENST00000567445 PRM1P04553 51 aa1.47□□□□□ -2.17
CDH13-210ENST00000567445 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
CDH13-210ENST00000567445 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 54.3 ms