RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CPS1P31327 1500 aa-0.85□□□□□ -2.55
CDH1-211ENST00000567320 ABCA5Q8WWZ7 1642 aa-0.86□□□□□ -2.55
CDH1-211ENST00000567320 TTTY10Q9BZA0 68 aa-0.86□□□□□ -2.55
CDH1-211ENST00000567320 EFCAB5A4FU69 1503 aa-0.86□□□□□ -2.55
CDH1-211ENST00000567320 CENPEQ02224 2701 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 ABCA10Q8WWZ4 1543 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 H0YGX0 51 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 SERF2P84101 59 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 MKI67P46013 3256 aaKnown RBP-0.87□□□□□ -2.55
CDH1-211ENST00000567320 XIRP2A4UGR9 3374 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 CEP250Q9BV73 2442 aa-0.87□□□□□ -2.55
CDH1-211ENST00000567320 ADCY10Q96PN6 1610 aa-0.88□□□□□ -2.55
CDH1-211ENST00000567320 PRXQ9BXM0 1461 aa-0.88□□□□□ -2.55
CDH1-211ENST00000567320 TRPM2O94759 1503 aa-0.89□□□□□ -2.55
CDH1-211ENST00000567320 SMIM2Q9BVW6 85 aa-0.89□□□□□ -2.55
CDH1-211ENST00000567320 UNC80Q8N2C7 3258 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 DNAH12Q6ZR08 3092 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 DNAH14Q0VDD8 3507 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 PLNP26678 52 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 S100ZQ8WXG8 99 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 SMCO4Q9NRQ5 59 aa-0.9□□□□□ -2.55
CDH1-211ENST00000567320 LOC400499M0QZD8 3231 aa-0.91□□□□□ -2.55
CDH1-211ENST00000567320 ABCC8Q09428 1581 aa-0.91□□□□□ -2.55
CDH1-211ENST00000567320 CFAP47Q6ZTR5 3102 aa-0.91□□□□□ -2.56
CDH1-211ENST00000567320 PDCD5O14737 125 aa-0.91□□□□□ -2.56
CDH1-211ENST00000567320 DEFB133Q30KQ1 61 aa-0.91□□□□□ -2.56
CDH1-211ENST00000567320 FANCD2Q9BXW9 1451 aa-0.92□□□□□ -2.56
CDH1-211ENST00000567320 A0A096LNI7 61 aa-0.92□□□□□ -2.56
CDH1-211ENST00000567320 USP34Q70CQ2 3546 aa-0.92□□□□□ -2.56
CDH1-211ENST00000567320 DUOX1Q9NRD9 1551 aa-0.92□□□□□ -2.56
CDH1-211ENST00000567320 ERICH3Q5RHP9 1530 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 ASPMQ8IZT6 3477 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 NDUFA1O15239 70 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 HTN1P15515 57 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 RHPN1-AS1Q9BWJ2 59 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 TOMM7Q9P0U1 55 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 BRCA2P51587 3418 aa-0.93□□□□□ -2.56
CDH1-211ENST00000567320 A0A087WWC5 75 aa-0.94□□□□□ -2.56
CDH1-211ENST00000567320 LINC01590Q5TEZ4 76 aa-0.95□□□□□ -2.56
CDH1-211ENST00000567320 TOP2AP11388 1531 aaKnown RBP-0.97□□□□□ -2.56
CDH1-211ENST00000567320 CENPFP49454 3210 aa-0.97□□□□□ -2.57
CDH1-211ENST00000567320 VCANP13611 3396 aa-0.98□□□□□ -2.57
CDH1-211ENST00000567320 DEFB124Q8NES8 71 aa-0.98□□□□□ -2.57
CDH1-211ENST00000567320 CMC2Q9NRP2 79 aa-0.98□□□□□ -2.57
CDH1-211ENST00000567320 SAMD9LQ8IVG5 1584 aa-0.99□□□□□ -2.57
CDH1-211ENST00000567320 CD52P31358 61 aa-0.99□□□□□ -2.57
CDH1-211ENST00000567320 RPL39P62891 51 aaKnown RBP-0.99□□□□□ -2.57
CDH1-211ENST00000567320 SMIM5Q71RC9 77 aa-0.99□□□□□ -2.57
CDH1-211ENST00000567320 DEFB104AQ8WTQ1 72 aa-1□□□□□ -2.57
CDH1-211ENST00000567320 CDH23Q9H251 3354 aa-1□□□□□ -2.57
CDH1-211ENST00000567320 ATP7AQ04656 1500 aa-1□□□□□ -2.57
CDH1-211ENST00000567320 RPL39LQ96EH5 51 aaKnown RBP-1.01□□□□□ -2.57
CDH1-211ENST00000567320 MROH2BQ7Z745 1585 aa-1.01□□□□□ -2.57
CDH1-211ENST00000567320 LINC01556Q5JQF7 62 aa-1.03□□□□□ -2.57
CDH1-211ENST00000567320 VPS13AQ96RL7 3174 aa-1.03□□□□□ -2.57
CDH1-211ENST00000567320 IQGAP2Q13576 1575 aa-1.06□□□□□ -2.58
CDH1-211ENST00000567320 UTRNP46939 3433 aa-1.09□□□□□ -2.58
CDH1-211ENST00000567320 SMIM31A0A1B0GVY4 71 aa-1.1□□□□□ -2.59
CDH1-211ENST00000567320 SNRPGP15A8MWD9 76 aa-1.11□□□□□ -2.59
CDH1-211ENST00000567320 H3BUX3 64 aa-1.11□□□□□ -2.59
CDH1-211ENST00000567320 APELAP0DMC3 54 aa-1.11□□□□□ -2.59
CDH1-211ENST00000567320 A0A096LPF7 62 aa-1.12□□□□□ -2.59
CDH1-211ENST00000567320 K7EIM0 57 aa-1.16□□□□□ -2.6
CDH1-211ENST00000567320 TOMM5Q8N4H5 51 aa-1.16□□□□□ -2.6
CDH1-211ENST00000567320 HTN3P15516 51 aa-1.19□□□□□ -2.6
CDH1-211ENST00000567320 PRCDQ00LT1 54 aa-1.2□□□□□ -2.6
CDH1-211ENST00000567320 ARHGAP5-AS1Q96IT6 56 aa-1.2□□□□□ -2.6
CDH1-211ENST00000567320 TMEM167AQ8TBQ9 72 aa-1.21□□□□□ -2.6
CDH1-211ENST00000567320 GCC2Q8IWJ2 1684 aa-1.21□□□□□ -2.6
CDH1-211ENST00000567320 GOLGB1Q14789 3259 aaKnown RBP-1.24□□□□□ -2.61
CDH1-211ENST00000567320 RPL39P5Q59GN2 51 aa-1.26□□□□□ -2.61
CDH1-211ENST00000567320 DEFB108AA8MXU0 73 aa-1.29□□□□□ -2.62
CDH1-211ENST00000567320 H3BSH0 61 aa-1.29□□□□□ -2.62
CDH1-211ENST00000567320 SNRPGP62308 76 aaKnown RBP-1.31□□□□□ -2.62
CDH1-211ENST00000567320 Q9Y3F1 56 aa-1.35□□□□□ -2.63
CDH1-211ENST00000567320 DEFB108BQ8NET1 73 aa-1.39□□□□□ -2.63
CDH1-211ENST00000567320 COX14Q96I36 57 aa-1.39□□□□□ -2.63
CDH1-211ENST00000567320 STATHP02808 62 aa-1.52□□□□□ -2.65
Retrieved 78 of 20,778 RNA–protein pairs in 76.4 ms