RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
CNOT1-210ENST00000567133 A8MU10 97 aa4.17□□□□□ -1.74
CNOT1-210ENST00000567133 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
CNOT1-210ENST00000567133 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
CNOT1-210ENST00000567133 PRR15LQ9BU68 103 aa4.16□□□□□ -1.74
CNOT1-210ENST00000567133 PSPHP1O15172 72 aa4.14□□□□□ -1.75
CNOT1-210ENST00000567133 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
CNOT1-210ENST00000567133 MT1EP04732 61 aa4.08□□□□□ -1.76
CNOT1-210ENST00000567133 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
CNOT1-210ENST00000567133 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
CNOT1-210ENST00000567133 A6NED7 52 aa4.05□□□□□ -1.76
CNOT1-210ENST00000567133 UQCR11O14957 56 aa4.03□□□□□ -1.76
CNOT1-210ENST00000567133 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
CNOT1-210ENST00000567133 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
CNOT1-210ENST00000567133 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
CNOT1-210ENST00000567133 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
CNOT1-210ENST00000567133 TNP1P09430 55 aa3.99□□□□□ -1.77
CNOT1-210ENST00000567133 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
CNOT1-210ENST00000567133 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
CNOT1-210ENST00000567133 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
CNOT1-210ENST00000567133 MT1GP13640 62 aa3.93□□□□□ -1.78
CNOT1-210ENST00000567133 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
CNOT1-210ENST00000567133 MT1LQ93083 61 aa3.91□□□□□ -1.78
CNOT1-210ENST00000567133 MT1MQ8N339 61 aa3.89□□□□□ -1.79
CNOT1-210ENST00000567133 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
CNOT1-210ENST00000567133 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
CNOT1-210ENST00000567133 K7ERS5 55 aa3.83□□□□□ -1.8
CNOT1-210ENST00000567133 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
CNOT1-210ENST00000567133 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
CNOT1-210ENST00000567133 MT4P47944 62 aa3.77□□□□□ -1.81
CNOT1-210ENST00000567133 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
CNOT1-210ENST00000567133 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
CNOT1-210ENST00000567133 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
CNOT1-210ENST00000567133 ROMO1P60602 79 aa3.64□□□□□ -1.83
CNOT1-210ENST00000567133 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
CNOT1-210ENST00000567133 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
CNOT1-210ENST00000567133 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
CNOT1-210ENST00000567133 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
CNOT1-210ENST00000567133 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-210ENST00000567133 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
CNOT1-210ENST00000567133 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CNOT1-210ENST00000567133 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
CNOT1-210ENST00000567133 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
CNOT1-210ENST00000567133 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
CNOT1-210ENST00000567133 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
CNOT1-210ENST00000567133 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
CNOT1-210ENST00000567133 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
CNOT1-210ENST00000567133 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
CNOT1-210ENST00000567133 MT1AP04731 61 aa3.31□□□□□ -1.88
CNOT1-210ENST00000567133 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
CNOT1-210ENST00000567133 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CNOT1-210ENST00000567133 MT3P25713 68 aa3.24□□□□□ -1.89
CNOT1-210ENST00000567133 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
CNOT1-210ENST00000567133 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CNOT1-210ENST00000567133 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CNOT1-210ENST00000567133 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
CNOT1-210ENST00000567133 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
CNOT1-210ENST00000567133 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
CNOT1-210ENST00000567133 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
CNOT1-210ENST00000567133 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
CNOT1-210ENST00000567133 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
CNOT1-210ENST00000567133 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
CNOT1-210ENST00000567133 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
CNOT1-210ENST00000567133 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-210ENST00000567133 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
CNOT1-210ENST00000567133 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
CNOT1-210ENST00000567133 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CNOT1-210ENST00000567133 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
CNOT1-210ENST00000567133 LCE1CQ5T751 118 aa2.54□□□□□ -2
CNOT1-210ENST00000567133 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CNOT1-210ENST00000567133 INE1O15225 51 aa2.4□□□□□ -2.03
CNOT1-210ENST00000567133 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CNOT1-210ENST00000567133 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CNOT1-210ENST00000567133 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CNOT1-210ENST00000567133 PRM1P04553 51 aa1.88□□□□□ -2.11
CNOT1-210ENST00000567133 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CNOT1-210ENST00000567133 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CNOT1-210ENST00000567133 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 26.5 ms