RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
CAPN3-216ENST00000567071 R4GN34 69 aa4.04□□□□□ -1.76
CAPN3-216ENST00000567071 A0A1B0GU33 70 aa4.03□□□□□ -1.76
CAPN3-216ENST00000567071 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
CAPN3-216ENST00000567071 MT4P47944 62 aa4□□□□□ -1.77
CAPN3-216ENST00000567071 LINC01554Q52M75 96 aa4□□□□□ -1.77
CAPN3-216ENST00000567071 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
CAPN3-216ENST00000567071 MT1XP80297 61 aa3.97□□□□□ -1.77
CAPN3-216ENST00000567071 A0A0D9SG42 100 aa3.95□□□□□ -1.78
CAPN3-216ENST00000567071 UQCR11O14957 56 aa3.94□□□□□ -1.78
CAPN3-216ENST00000567071 A6NED7 52 aa3.93□□□□□ -1.78
CAPN3-216ENST00000567071 A8MU10 97 aa3.93□□□□□ -1.78
CAPN3-216ENST00000567071 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
CAPN3-216ENST00000567071 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
CAPN3-216ENST00000567071 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
CAPN3-216ENST00000567071 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
CAPN3-216ENST00000567071 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
CAPN3-216ENST00000567071 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
CAPN3-216ENST00000567071 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CAPN3-216ENST00000567071 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
CAPN3-216ENST00000567071 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
CAPN3-216ENST00000567071 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
CAPN3-216ENST00000567071 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
CAPN3-216ENST00000567071 K7ERS5 55 aa3.75□□□□□ -1.81
CAPN3-216ENST00000567071 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
CAPN3-216ENST00000567071 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
CAPN3-216ENST00000567071 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CAPN3-216ENST00000567071 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
CAPN3-216ENST00000567071 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CAPN3-216ENST00000567071 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
CAPN3-216ENST00000567071 MT1EP04732 61 aa3.58□□□□□ -1.84
CAPN3-216ENST00000567071 ROMO1P60602 79 aa3.57□□□□□ -1.84
CAPN3-216ENST00000567071 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
CAPN3-216ENST00000567071 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
CAPN3-216ENST00000567071 TNP1P09430 55 aa3.56□□□□□ -1.84
CAPN3-216ENST00000567071 MT1GP13640 62 aa3.56□□□□□ -1.84
CAPN3-216ENST00000567071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CAPN3-216ENST00000567071 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
CAPN3-216ENST00000567071 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CAPN3-216ENST00000567071 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
CAPN3-216ENST00000567071 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
CAPN3-216ENST00000567071 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
CAPN3-216ENST00000567071 MT1MQ8N339 61 aa3.46□□□□□ -1.86
CAPN3-216ENST00000567071 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
CAPN3-216ENST00000567071 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
CAPN3-216ENST00000567071 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
CAPN3-216ENST00000567071 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
CAPN3-216ENST00000567071 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CAPN3-216ENST00000567071 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
CAPN3-216ENST00000567071 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
CAPN3-216ENST00000567071 MT3P25713 68 aa3.33□□□□□ -1.88
CAPN3-216ENST00000567071 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
CAPN3-216ENST00000567071 MT1LQ93083 61 aa3.31□□□□□ -1.88
CAPN3-216ENST00000567071 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CAPN3-216ENST00000567071 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
CAPN3-216ENST00000567071 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
CAPN3-216ENST00000567071 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
CAPN3-216ENST00000567071 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
CAPN3-216ENST00000567071 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
CAPN3-216ENST00000567071 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
CAPN3-216ENST00000567071 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CAPN3-216ENST00000567071 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CAPN3-216ENST00000567071 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CAPN3-216ENST00000567071 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
CAPN3-216ENST00000567071 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CAPN3-216ENST00000567071 MT1AP04731 61 aa2.81□□□□□ -1.96
CAPN3-216ENST00000567071 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
CAPN3-216ENST00000567071 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
CAPN3-216ENST00000567071 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CAPN3-216ENST00000567071 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
CAPN3-216ENST00000567071 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CAPN3-216ENST00000567071 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CAPN3-216ENST00000567071 INE1O15225 51 aa2.09□□□□□ -2.07
CAPN3-216ENST00000567071 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
CAPN3-216ENST00000567071 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CAPN3-216ENST00000567071 PRM1P04553 51 aa1.88□□□□□ -2.11
CAPN3-216ENST00000567071 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
CAPN3-216ENST00000567071 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms