RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
SMPD3-207ENST00000566466 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
SMPD3-207ENST00000566466 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
SMPD3-207ENST00000566466 NEBP20929 6669 aa3.53□□□□□ -1.84
SMPD3-207ENST00000566466 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
SMPD3-207ENST00000566466 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
SMPD3-207ENST00000566466 MT3P25713 68 aa3.49□□□□□ -1.85
SMPD3-207ENST00000566466 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
SMPD3-207ENST00000566466 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
SMPD3-207ENST00000566466 TNP1P09430 55 aa3.46□□□□□ -1.86
SMPD3-207ENST00000566466 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SMPD3-207ENST00000566466 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
SMPD3-207ENST00000566466 K7ERS5 55 aa3.44□□□□□ -1.86
SMPD3-207ENST00000566466 MT1EP04732 61 aa3.44□□□□□ -1.86
SMPD3-207ENST00000566466 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
SMPD3-207ENST00000566466 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
SMPD3-207ENST00000566466 ROMO1P60602 79 aa3.38□□□□□ -1.87
SMPD3-207ENST00000566466 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
SMPD3-207ENST00000566466 SPRR2EP22531 72 aa3.37□□□□□ -1.87
SMPD3-207ENST00000566466 SPRR2BP35325 72 aa3.37□□□□□ -1.87
SMPD3-207ENST00000566466 SPRR2AP35326 72 aa3.37□□□□□ -1.87
SMPD3-207ENST00000566466 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SMPD3-207ENST00000566466 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
SMPD3-207ENST00000566466 MT1LQ93083 61 aa3.32□□□□□ -1.88
SMPD3-207ENST00000566466 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
SMPD3-207ENST00000566466 SPRR2DP22532 72 aa3.24□□□□□ -1.89
SMPD3-207ENST00000566466 MT1MQ8N339 61 aa3.24□□□□□ -1.89
SMPD3-207ENST00000566466 MT1GP13640 62 aa3.23□□□□□ -1.89
SMPD3-207ENST00000566466 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SMPD3-207ENST00000566466 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SMPD3-207ENST00000566466 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
SMPD3-207ENST00000566466 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
SMPD3-207ENST00000566466 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
SMPD3-207ENST00000566466 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
SMPD3-207ENST00000566466 PMAIP1Q13794 54 aa3.17□□□□□ -1.9
SMPD3-207ENST00000566466 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
SMPD3-207ENST00000566466 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
SMPD3-207ENST00000566466 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
SMPD3-207ENST00000566466 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
SMPD3-207ENST00000566466 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
SMPD3-207ENST00000566466 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
SMPD3-207ENST00000566466 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
SMPD3-207ENST00000566466 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
SMPD3-207ENST00000566466 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
SMPD3-207ENST00000566466 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
SMPD3-207ENST00000566466 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SMPD3-207ENST00000566466 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
SMPD3-207ENST00000566466 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
SMPD3-207ENST00000566466 MT4P47944 62 aa2.83□□□□□ -1.96
SMPD3-207ENST00000566466 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
SMPD3-207ENST00000566466 MT1AP04731 61 aa2.82□□□□□ -1.96
SMPD3-207ENST00000566466 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
SMPD3-207ENST00000566466 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
SMPD3-207ENST00000566466 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SMPD3-207ENST00000566466 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SMPD3-207ENST00000566466 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
SMPD3-207ENST00000566466 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
SMPD3-207ENST00000566466 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SMPD3-207ENST00000566466 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
SMPD3-207ENST00000566466 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
SMPD3-207ENST00000566466 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
SMPD3-207ENST00000566466 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SMPD3-207ENST00000566466 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SMPD3-207ENST00000566466 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
SMPD3-207ENST00000566466 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
SMPD3-207ENST00000566466 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SMPD3-207ENST00000566466 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
SMPD3-207ENST00000566466 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
SMPD3-207ENST00000566466 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
SMPD3-207ENST00000566466 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
SMPD3-207ENST00000566466 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SMPD3-207ENST00000566466 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
SMPD3-207ENST00000566466 INE1O15225 51 aa1.8□□□□□ -2.12
SMPD3-207ENST00000566466 PRM1P04553 51 aa1.77□□□□□ -2.13
SMPD3-207ENST00000566466 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
SMPD3-207ENST00000566466 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SMPD3-207ENST00000566466 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
SMPD3-207ENST00000566466 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms