RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
GDPD3-204ENST00000566434 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
GDPD3-204ENST00000566434 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
GDPD3-204ENST00000566434 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
GDPD3-204ENST00000566434 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
GDPD3-204ENST00000566434 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
GDPD3-204ENST00000566434 MT1GP13640 62 aa4.63□□□□□ -1.67
GDPD3-204ENST00000566434 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
GDPD3-204ENST00000566434 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
GDPD3-204ENST00000566434 MT1LQ93083 61 aa4.62□□□□□ -1.67
GDPD3-204ENST00000566434 ROMO1P60602 79 aa4.6□□□□□ -1.67
GDPD3-204ENST00000566434 MT1MQ8N339 61 aa4.56□□□□□ -1.68
GDPD3-204ENST00000566434 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
GDPD3-204ENST00000566434 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
GDPD3-204ENST00000566434 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
GDPD3-204ENST00000566434 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
GDPD3-204ENST00000566434 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
GDPD3-204ENST00000566434 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
GDPD3-204ENST00000566434 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
GDPD3-204ENST00000566434 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
GDPD3-204ENST00000566434 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
GDPD3-204ENST00000566434 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
GDPD3-204ENST00000566434 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
GDPD3-204ENST00000566434 MT4P47944 62 aa4.23□□□□□ -1.73
GDPD3-204ENST00000566434 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
GDPD3-204ENST00000566434 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
GDPD3-204ENST00000566434 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
GDPD3-204ENST00000566434 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
GDPD3-204ENST00000566434 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
GDPD3-204ENST00000566434 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
GDPD3-204ENST00000566434 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
GDPD3-204ENST00000566434 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
GDPD3-204ENST00000566434 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
GDPD3-204ENST00000566434 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
GDPD3-204ENST00000566434 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
GDPD3-204ENST00000566434 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
GDPD3-204ENST00000566434 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
GDPD3-204ENST00000566434 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
GDPD3-204ENST00000566434 MT1AP04731 61 aa3.94□□□□□ -1.78
GDPD3-204ENST00000566434 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
GDPD3-204ENST00000566434 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
GDPD3-204ENST00000566434 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
GDPD3-204ENST00000566434 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
GDPD3-204ENST00000566434 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
GDPD3-204ENST00000566434 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
GDPD3-204ENST00000566434 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
GDPD3-204ENST00000566434 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
GDPD3-204ENST00000566434 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
GDPD3-204ENST00000566434 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
GDPD3-204ENST00000566434 MT3P25713 68 aa3.61□□□□□ -1.83
GDPD3-204ENST00000566434 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
GDPD3-204ENST00000566434 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
GDPD3-204ENST00000566434 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
GDPD3-204ENST00000566434 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
GDPD3-204ENST00000566434 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
GDPD3-204ENST00000566434 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
GDPD3-204ENST00000566434 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
GDPD3-204ENST00000566434 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
GDPD3-204ENST00000566434 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
GDPD3-204ENST00000566434 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
GDPD3-204ENST00000566434 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
GDPD3-204ENST00000566434 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
GDPD3-204ENST00000566434 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
GDPD3-204ENST00000566434 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
GDPD3-204ENST00000566434 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
GDPD3-204ENST00000566434 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
GDPD3-204ENST00000566434 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
GDPD3-204ENST00000566434 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
GDPD3-204ENST00000566434 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
GDPD3-204ENST00000566434 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
GDPD3-204ENST00000566434 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
GDPD3-204ENST00000566434 PRM1P04553 51 aa2.37□□□□□ -2.03
GDPD3-204ENST00000566434 INE1O15225 51 aa2.35□□□□□ -2.03
GDPD3-204ENST00000566434 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
GDPD3-204ENST00000566434 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
GDPD3-204ENST00000566434 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
GDPD3-204ENST00000566434 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
GDPD3-204ENST00000566434 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms