RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
RNF40-205ENST00000563909 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
RNF40-205ENST00000563909 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
RNF40-205ENST00000563909 A6NED7 52 aa6.07□□□□□ -1.44
RNF40-205ENST00000563909 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
RNF40-205ENST00000563909 K7ERS5 55 aa6.02□□□□□ -1.45
RNF40-205ENST00000563909 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
RNF40-205ENST00000563909 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
RNF40-205ENST00000563909 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
RNF40-205ENST00000563909 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
RNF40-205ENST00000563909 KRTAP19-7Q3SYF9 63 aa5.92□□□□□ -1.46
RNF40-205ENST00000563909 MT1EP04732 61 aa5.91□□□□□ -1.46
RNF40-205ENST00000563909 TNP1P09430 55 aa5.89□□□□□ -1.47
RNF40-205ENST00000563909 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
RNF40-205ENST00000563909 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
RNF40-205ENST00000563909 MT1GP13640 62 aa5.79□□□□□ -1.48
RNF40-205ENST00000563909 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
RNF40-205ENST00000563909 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
RNF40-205ENST00000563909 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
RNF40-205ENST00000563909 MT1MQ8N339 61 aa5.69□□□□□ -1.5
RNF40-205ENST00000563909 ROMO1P60602 79 aa5.65□□□□□ -1.5
RNF40-205ENST00000563909 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
RNF40-205ENST00000563909 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
RNF40-205ENST00000563909 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
RNF40-205ENST00000563909 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
RNF40-205ENST00000563909 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
RNF40-205ENST00000563909 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
RNF40-205ENST00000563909 MT1LQ93083 61 aa5.51□□□□□ -1.53
RNF40-205ENST00000563909 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
RNF40-205ENST00000563909 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
RNF40-205ENST00000563909 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
RNF40-205ENST00000563909 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
RNF40-205ENST00000563909 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
RNF40-205ENST00000563909 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
RNF40-205ENST00000563909 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
RNF40-205ENST00000563909 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
RNF40-205ENST00000563909 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
RNF40-205ENST00000563909 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
RNF40-205ENST00000563909 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
RNF40-205ENST00000563909 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
RNF40-205ENST00000563909 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
RNF40-205ENST00000563909 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
RNF40-205ENST00000563909 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
RNF40-205ENST00000563909 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
RNF40-205ENST00000563909 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
RNF40-205ENST00000563909 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
RNF40-205ENST00000563909 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
RNF40-205ENST00000563909 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
RNF40-205ENST00000563909 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
RNF40-205ENST00000563909 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
RNF40-205ENST00000563909 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
RNF40-205ENST00000563909 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
RNF40-205ENST00000563909 MT1AP04731 61 aa4.67□□□□□ -1.66
RNF40-205ENST00000563909 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
RNF40-205ENST00000563909 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
RNF40-205ENST00000563909 MT3P25713 68 aa4.32□□□□□ -1.72
RNF40-205ENST00000563909 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
RNF40-205ENST00000563909 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
RNF40-205ENST00000563909 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
RNF40-205ENST00000563909 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
RNF40-205ENST00000563909 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
RNF40-205ENST00000563909 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
RNF40-205ENST00000563909 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
RNF40-205ENST00000563909 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
RNF40-205ENST00000563909 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
RNF40-205ENST00000563909 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
RNF40-205ENST00000563909 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
RNF40-205ENST00000563909 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
RNF40-205ENST00000563909 H3BS24 57 aa3.57□□□□□ -1.84
RNF40-205ENST00000563909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
RNF40-205ENST00000563909 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
RNF40-205ENST00000563909 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
RNF40-205ENST00000563909 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
RNF40-205ENST00000563909 INE1O15225 51 aa3.08□□□□□ -1.92
RNF40-205ENST00000563909 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
RNF40-205ENST00000563909 PRM1P04553 51 aa2.9□□□□□ -1.95
RNF40-205ENST00000563909 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
RNF40-205ENST00000563909 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms