RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
HDGFL3-203ENST00000563404 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
HDGFL3-203ENST00000563404 K7ERS5 55 aa6.14□□□□□ -1.43
HDGFL3-203ENST00000563404 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
HDGFL3-203ENST00000563404 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
HDGFL3-203ENST00000563404 MT1GP13640 62 aa6.08□□□□□ -1.44
HDGFL3-203ENST00000563404 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
HDGFL3-203ENST00000563404 MT4P47944 62 aa6.05□□□□□ -1.44
HDGFL3-203ENST00000563404 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
HDGFL3-203ENST00000563404 MT1MQ8N339 61 aa6.01□□□□□ -1.45
HDGFL3-203ENST00000563404 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
HDGFL3-203ENST00000563404 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
HDGFL3-203ENST00000563404 MT1LQ93083 61 aa5.96□□□□□ -1.46
HDGFL3-203ENST00000563404 TNP1P09430 55 aa5.94□□□□□ -1.46
HDGFL3-203ENST00000563404 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
HDGFL3-203ENST00000563404 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
HDGFL3-203ENST00000563404 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
HDGFL3-203ENST00000563404 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
HDGFL3-203ENST00000563404 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
HDGFL3-203ENST00000563404 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
HDGFL3-203ENST00000563404 ROMO1P60602 79 aa5.79□□□□□ -1.48
HDGFL3-203ENST00000563404 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
HDGFL3-203ENST00000563404 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
HDGFL3-203ENST00000563404 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
HDGFL3-203ENST00000563404 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
HDGFL3-203ENST00000563404 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
HDGFL3-203ENST00000563404 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
HDGFL3-203ENST00000563404 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
HDGFL3-203ENST00000563404 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
HDGFL3-203ENST00000563404 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
HDGFL3-203ENST00000563404 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
HDGFL3-203ENST00000563404 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
HDGFL3-203ENST00000563404 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
HDGFL3-203ENST00000563404 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
HDGFL3-203ENST00000563404 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
HDGFL3-203ENST00000563404 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
HDGFL3-203ENST00000563404 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
HDGFL3-203ENST00000563404 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
HDGFL3-203ENST00000563404 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
HDGFL3-203ENST00000563404 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
HDGFL3-203ENST00000563404 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
HDGFL3-203ENST00000563404 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
HDGFL3-203ENST00000563404 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
HDGFL3-203ENST00000563404 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
HDGFL3-203ENST00000563404 MT1AP04731 61 aa5.05□□□□□ -1.6
HDGFL3-203ENST00000563404 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-203ENST00000563404 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
HDGFL3-203ENST00000563404 MUC5ACP98088 5654 aa5.03□□□□□ -1.6
HDGFL3-203ENST00000563404 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
HDGFL3-203ENST00000563404 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
HDGFL3-203ENST00000563404 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
HDGFL3-203ENST00000563404 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
HDGFL3-203ENST00000563404 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
HDGFL3-203ENST00000563404 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HDGFL3-203ENST00000563404 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
HDGFL3-203ENST00000563404 MT3P25713 68 aa4.61□□□□□ -1.67
HDGFL3-203ENST00000563404 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
HDGFL3-203ENST00000563404 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
HDGFL3-203ENST00000563404 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
HDGFL3-203ENST00000563404 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
HDGFL3-203ENST00000563404 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
HDGFL3-203ENST00000563404 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
HDGFL3-203ENST00000563404 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
HDGFL3-203ENST00000563404 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
HDGFL3-203ENST00000563404 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
HDGFL3-203ENST00000563404 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
HDGFL3-203ENST00000563404 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
HDGFL3-203ENST00000563404 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
HDGFL3-203ENST00000563404 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
HDGFL3-203ENST00000563404 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
HDGFL3-203ENST00000563404 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
HDGFL3-203ENST00000563404 INE1O15225 51 aa3.31□□□□□ -1.88
HDGFL3-203ENST00000563404 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
HDGFL3-203ENST00000563404 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
HDGFL3-203ENST00000563404 H3BS24 57 aa3.08□□□□□ -1.92
HDGFL3-203ENST00000563404 PRM1P04553 51 aa2.94□□□□□ -1.94
HDGFL3-203ENST00000563404 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
HDGFL3-203ENST00000563404 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms