RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
SHF-210ENST00000561239 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
SHF-210ENST00000561239 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
SHF-210ENST00000561239 TNP1P09430 55 aa5.05□□□□□ -1.6
SHF-210ENST00000561239 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
SHF-210ENST00000561239 MT1EP04732 61 aa5.02□□□□□ -1.61
SHF-210ENST00000561239 A6NED7 52 aa5.01□□□□□ -1.61
SHF-210ENST00000561239 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
SHF-210ENST00000561239 K7ERS5 55 aa4.98□□□□□ -1.61
SHF-210ENST00000561239 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
SHF-210ENST00000561239 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
SHF-210ENST00000561239 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
SHF-210ENST00000561239 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
SHF-210ENST00000561239 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
SHF-210ENST00000561239 MT1GP13640 62 aa4.89□□□□□ -1.63
SHF-210ENST00000561239 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
SHF-210ENST00000561239 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
SHF-210ENST00000561239 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SHF-210ENST00000561239 MT1LQ93083 61 aa4.83□□□□□ -1.64
SHF-210ENST00000561239 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
SHF-210ENST00000561239 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
SHF-210ENST00000561239 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
SHF-210ENST00000561239 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SHF-210ENST00000561239 ROMO1P60602 79 aa4.74□□□□□ -1.65
SHF-210ENST00000561239 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
SHF-210ENST00000561239 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
SHF-210ENST00000561239 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
SHF-210ENST00000561239 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
SHF-210ENST00000561239 MT4P47944 62 aa4.52□□□□□ -1.69
SHF-210ENST00000561239 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SHF-210ENST00000561239 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
SHF-210ENST00000561239 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SHF-210ENST00000561239 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
SHF-210ENST00000561239 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SHF-210ENST00000561239 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
SHF-210ENST00000561239 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
SHF-210ENST00000561239 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SHF-210ENST00000561239 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
SHF-210ENST00000561239 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SHF-210ENST00000561239 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
SHF-210ENST00000561239 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
SHF-210ENST00000561239 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
SHF-210ENST00000561239 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
SHF-210ENST00000561239 H3BS24 57 aa4.15□□□□□ -1.75
SHF-210ENST00000561239 MT1AP04731 61 aa4.12□□□□□ -1.75
SHF-210ENST00000561239 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
SHF-210ENST00000561239 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
SHF-210ENST00000561239 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
SHF-210ENST00000561239 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
SHF-210ENST00000561239 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
SHF-210ENST00000561239 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
SHF-210ENST00000561239 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
SHF-210ENST00000561239 MT3P25713 68 aa3.78□□□□□ -1.8
SHF-210ENST00000561239 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
SHF-210ENST00000561239 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
SHF-210ENST00000561239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SHF-210ENST00000561239 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SHF-210ENST00000561239 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
SHF-210ENST00000561239 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
SHF-210ENST00000561239 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SHF-210ENST00000561239 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
SHF-210ENST00000561239 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
SHF-210ENST00000561239 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
SHF-210ENST00000561239 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SHF-210ENST00000561239 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
SHF-210ENST00000561239 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
SHF-210ENST00000561239 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
SHF-210ENST00000561239 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
SHF-210ENST00000561239 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
SHF-210ENST00000561239 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
SHF-210ENST00000561239 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SHF-210ENST00000561239 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SHF-210ENST00000561239 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
SHF-210ENST00000561239 INE1O15225 51 aa2.46□□□□□ -2.02
SHF-210ENST00000561239 PRM1P04553 51 aa2.43□□□□□ -2.02
SHF-210ENST00000561239 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SHF-210ENST00000561239 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SHF-210ENST00000561239 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 31.4 ms