RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-209ENST00000560559 KRTAP10-10P60014 251 aa2.16□□□□□ -2.06
BLM-209ENST00000560559 MUC17Q685J3 4493 aa2.15□□□□□ -2.07
BLM-209ENST00000560559 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
BLM-209ENST00000560559 Q6ZRN7 208 aaPredicted RBP2.14□□□□□ -2.07
BLM-209ENST00000560559 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
BLM-209ENST00000560559 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
BLM-209ENST00000560559 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
BLM-209ENST00000560559 KMT2DO14686 5537 aa2.11□□□□□ -2.07
BLM-209ENST00000560559 HTN3P15516 51 aa2.11□□□□□ -2.07
BLM-209ENST00000560559 PRLHP81277 87 aa2.11□□□□□ -2.07
BLM-209ENST00000560559 PRO0255Q9UI72 69 aa2.11□□□□□ -2.07
BLM-209ENST00000560559 A0A096LPF7 62 aa2.1□□□□□ -2.07
BLM-209ENST00000560559 SPINK1P00995 79 aa2.1□□□□□ -2.07
BLM-209ENST00000560559 INE1O15225 51 aa2.09□□□□□ -2.07
BLM-209ENST00000560559 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
BLM-209ENST00000560559 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
BLM-209ENST00000560559 SPART-AS1P0CW21 52 aa2.05□□□□□ -2.08
BLM-209ENST00000560559 S4R3F8 94 aa2.04□□□□□ -2.08
BLM-209ENST00000560559 A0A096LNI7 61 aa2.03□□□□□ -2.08
BLM-209ENST00000560559 MT1HP80294 61 aa2.03□□□□□ -2.08
BLM-209ENST00000560559 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
BLM-209ENST00000560559 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
BLM-209ENST00000560559 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
BLM-209ENST00000560559 A0A0D9SG42 100 aa1.99□□□□□ -2.09
BLM-209ENST00000560559 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
BLM-209ENST00000560559 M0R2T5 61 aa1.98□□□□□ -2.09
BLM-209ENST00000560559 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
BLM-209ENST00000560559 SPINK6Q6UWN8 80 aa1.98□□□□□ -2.09
BLM-209ENST00000560559 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
BLM-209ENST00000560559 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
BLM-209ENST00000560559 LINC01556Q5JQF7 62 aa1.95□□□□□ -2.1
BLM-209ENST00000560559 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
BLM-209ENST00000560559 FLGP20930 4061 aaPredicted RBP1.93□□□□□ -2.1
BLM-209ENST00000560559 H3BNG1 76 aa1.92□□□□□ -2.1
BLM-209ENST00000560559 KRTAP19-2Q3LHN2 52 aa1.92□□□□□ -2.1
BLM-209ENST00000560559 KRTAP19-6Q3LI70 58 aa1.92□□□□□ -2.1
BLM-209ENST00000560559 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
BLM-209ENST00000560559 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
BLM-209ENST00000560559 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
BLM-209ENST00000560559 SPRR2EP22531 72 aa1.81□□□□□ -2.12
BLM-209ENST00000560559 SPRR2BP35325 72 aa1.81□□□□□ -2.12
BLM-209ENST00000560559 SPRR2AP35326 72 aa1.81□□□□□ -2.12
BLM-209ENST00000560559 M0QZ58 72 aa1.8□□□□□ -2.12
BLM-209ENST00000560559 SPRR2DP22532 72 aa1.76□□□□□ -2.13
BLM-209ENST00000560559 MT2AP02795 61 aa1.75□□□□□ -2.13
BLM-209ENST00000560559 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
BLM-209ENST00000560559 MT1FP04733 61 aa1.74□□□□□ -2.13
BLM-209ENST00000560559 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
BLM-209ENST00000560559 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
BLM-209ENST00000560559 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
BLM-209ENST00000560559 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
BLM-209ENST00000560559 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
BLM-209ENST00000560559 C9orf92A6NGG3 77 aa1.63□□□□□ -2.15
BLM-209ENST00000560559 TNP1P09430 55 aa1.62□□□□□ -2.15
BLM-209ENST00000560559 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
BLM-209ENST00000560559 MT4P47944 62 aa1.6□□□□□ -2.15
BLM-209ENST00000560559 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
BLM-209ENST00000560559 KRTAP8-1Q8IUC2 63 aa1.52□□□□□ -2.17
BLM-209ENST00000560559 MT1BP07438 61 aa1.44□□□□□ -2.18
BLM-209ENST00000560559 KRTAP19-8Q3LI54 63 aa1.33□□□□□ -2.2
BLM-209ENST00000560559 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
BLM-209ENST00000560559 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
BLM-209ENST00000560559 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
BLM-209ENST00000560559 PRM1P04553 51 aa1.27□□□□□ -2.21
BLM-209ENST00000560559 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
BLM-209ENST00000560559 MT1XP80297 61 aa1.22□□□□□ -2.21
BLM-209ENST00000560559 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
BLM-209ENST00000560559 MT1EP04732 61 aa1.12□□□□□ -2.23
BLM-209ENST00000560559 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
BLM-209ENST00000560559 MT1AP04731 61 aa1.11□□□□□ -2.23
BLM-209ENST00000560559 MT1GP13640 62 aa1.11□□□□□ -2.23
BLM-209ENST00000560559 MT1MQ8N339 61 aa1.11□□□□□ -2.23
BLM-209ENST00000560559 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
BLM-209ENST00000560559 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
BLM-209ENST00000560559 MT1LQ93083 61 aa1.04□□□□□ -2.24
BLM-209ENST00000560559 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
BLM-209ENST00000560559 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
BLM-209ENST00000560559 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 101.7 ms