RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
RABGGTA-217ENST00000560521 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
RABGGTA-217ENST00000560521 MT4P47944 62 aa3.44□□□□□ -1.86
RABGGTA-217ENST00000560521 R4GN34 69 aa3.44□□□□□ -1.86
RABGGTA-217ENST00000560521 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
RABGGTA-217ENST00000560521 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
RABGGTA-217ENST00000560521 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
RABGGTA-217ENST00000560521 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
RABGGTA-217ENST00000560521 K7ERS5 55 aa3.4□□□□□ -1.87
RABGGTA-217ENST00000560521 M0QZ58 72 aa3.4□□□□□ -1.87
RABGGTA-217ENST00000560521 P0C880 135 aa3.4□□□□□ -1.87
RABGGTA-217ENST00000560521 A0A1B0GU33 70 aa3.39□□□□□ -1.87
RABGGTA-217ENST00000560521 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
RABGGTA-217ENST00000560521 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
RABGGTA-217ENST00000560521 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
RABGGTA-217ENST00000560521 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
RABGGTA-217ENST00000560521 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
RABGGTA-217ENST00000560521 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
RABGGTA-217ENST00000560521 MT1EP04732 61 aa3.34□□□□□ -1.87
RABGGTA-217ENST00000560521 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
RABGGTA-217ENST00000560521 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
RABGGTA-217ENST00000560521 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
RABGGTA-217ENST00000560521 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
RABGGTA-217ENST00000560521 MT1GP13640 62 aa3.27□□□□□ -1.89
RABGGTA-217ENST00000560521 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
RABGGTA-217ENST00000560521 MT1MQ8N339 61 aa3.21□□□□□ -1.9
RABGGTA-217ENST00000560521 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
RABGGTA-217ENST00000560521 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
RABGGTA-217ENST00000560521 A8MU10 97 aa3.16□□□□□ -1.9
RABGGTA-217ENST00000560521 ROMO1P60602 79 aa3.14□□□□□ -1.91
RABGGTA-217ENST00000560521 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
RABGGTA-217ENST00000560521 MT1LQ93083 61 aa3.13□□□□□ -1.91
RABGGTA-217ENST00000560521 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
RABGGTA-217ENST00000560521 A0A0D9SG42 100 aa3.1□□□□□ -1.91
RABGGTA-217ENST00000560521 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
RABGGTA-217ENST00000560521 CAMK2N1Q7Z7J9 78 aa3.09□□□□□ -1.91
RABGGTA-217ENST00000560521 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
RABGGTA-217ENST00000560521 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
RABGGTA-217ENST00000560521 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
RABGGTA-217ENST00000560521 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
RABGGTA-217ENST00000560521 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
RABGGTA-217ENST00000560521 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
RABGGTA-217ENST00000560521 TNP1P09430 55 aa2.95□□□□□ -1.94
RABGGTA-217ENST00000560521 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
RABGGTA-217ENST00000560521 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
RABGGTA-217ENST00000560521 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
RABGGTA-217ENST00000560521 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
RABGGTA-217ENST00000560521 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
RABGGTA-217ENST00000560521 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
RABGGTA-217ENST00000560521 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
RABGGTA-217ENST00000560521 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
RABGGTA-217ENST00000560521 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
RABGGTA-217ENST00000560521 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
RABGGTA-217ENST00000560521 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
RABGGTA-217ENST00000560521 MT1AP04731 61 aa2.65□□□□□ -1.99
RABGGTA-217ENST00000560521 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
RABGGTA-217ENST00000560521 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
RABGGTA-217ENST00000560521 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
RABGGTA-217ENST00000560521 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
RABGGTA-217ENST00000560521 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
RABGGTA-217ENST00000560521 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
RABGGTA-217ENST00000560521 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
RABGGTA-217ENST00000560521 MT3P25713 68 aa2.43□□□□□ -2.02
RABGGTA-217ENST00000560521 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
RABGGTA-217ENST00000560521 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
RABGGTA-217ENST00000560521 INE1O15225 51 aa2.25□□□□□ -2.05
RABGGTA-217ENST00000560521 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
RABGGTA-217ENST00000560521 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
RABGGTA-217ENST00000560521 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
RABGGTA-217ENST00000560521 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
RABGGTA-217ENST00000560521 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
RABGGTA-217ENST00000560521 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
RABGGTA-217ENST00000560521 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
RABGGTA-217ENST00000560521 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
RABGGTA-217ENST00000560521 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
RABGGTA-217ENST00000560521 PRM1P04553 51 aa1.56□□□□□ -2.16
RABGGTA-217ENST00000560521 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
RABGGTA-217ENST00000560521 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 39.5 ms