RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ROMO1P60602 79 aa3.31□□□□□ -1.88
LRRC28-215ENST00000559774 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
LRRC28-215ENST00000559774 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
LRRC28-215ENST00000559774 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
LRRC28-215ENST00000559774 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
LRRC28-215ENST00000559774 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
LRRC28-215ENST00000559774 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
LRRC28-215ENST00000559774 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
LRRC28-215ENST00000559774 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
LRRC28-215ENST00000559774 MDN1Q9NU22 5596 aa3.21□□□□□ -1.9
LRRC28-215ENST00000559774 NEBP20929 6669 aa3.2□□□□□ -1.9
LRRC28-215ENST00000559774 MT1EP04732 61 aa3.2□□□□□ -1.9
LRRC28-215ENST00000559774 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
LRRC28-215ENST00000559774 SPRR2EP22531 72 aa3.19□□□□□ -1.9
LRRC28-215ENST00000559774 SPRR2BP35325 72 aa3.19□□□□□ -1.9
LRRC28-215ENST00000559774 SPRR2AP35326 72 aa3.19□□□□□ -1.9
LRRC28-215ENST00000559774 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
LRRC28-215ENST00000559774 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
LRRC28-215ENST00000559774 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
LRRC28-215ENST00000559774 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
LRRC28-215ENST00000559774 MT1GP13640 62 aa3.12□□□□□ -1.91
LRRC28-215ENST00000559774 MT1LQ93083 61 aa3.11□□□□□ -1.91
LRRC28-215ENST00000559774 SPRR2DP22532 72 aa3.09□□□□□ -1.91
LRRC28-215ENST00000559774 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
LRRC28-215ENST00000559774 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
LRRC28-215ENST00000559774 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
LRRC28-215ENST00000559774 MT1MQ8N339 61 aa3.02□□□□□ -1.93
LRRC28-215ENST00000559774 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
LRRC28-215ENST00000559774 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
LRRC28-215ENST00000559774 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
LRRC28-215ENST00000559774 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
LRRC28-215ENST00000559774 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
LRRC28-215ENST00000559774 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
LRRC28-215ENST00000559774 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
LRRC28-215ENST00000559774 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
LRRC28-215ENST00000559774 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
LRRC28-215ENST00000559774 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-215ENST00000559774 SVIPQ8NHG7 77 aa2.75□□□□□ -1.97
LRRC28-215ENST00000559774 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
LRRC28-215ENST00000559774 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
LRRC28-215ENST00000559774 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
LRRC28-215ENST00000559774 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
LRRC28-215ENST00000559774 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
LRRC28-215ENST00000559774 MT1AP04731 61 aa2.65□□□□□ -1.99
LRRC28-215ENST00000559774 MT4P47944 62 aa2.64□□□□□ -1.99
LRRC28-215ENST00000559774 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
LRRC28-215ENST00000559774 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
LRRC28-215ENST00000559774 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
LRRC28-215ENST00000559774 LCE1EQ5T753 118 aa2.56□□□□□ -2
LRRC28-215ENST00000559774 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
LRRC28-215ENST00000559774 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
LRRC28-215ENST00000559774 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
LRRC28-215ENST00000559774 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
LRRC28-215ENST00000559774 MT3P25713 68 aa2.44□□□□□ -2.02
LRRC28-215ENST00000559774 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
LRRC28-215ENST00000559774 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
LRRC28-215ENST00000559774 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
LRRC28-215ENST00000559774 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
LRRC28-215ENST00000559774 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
LRRC28-215ENST00000559774 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
LRRC28-215ENST00000559774 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
LRRC28-215ENST00000559774 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
LRRC28-215ENST00000559774 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
LRRC28-215ENST00000559774 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
LRRC28-215ENST00000559774 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
LRRC28-215ENST00000559774 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
LRRC28-215ENST00000559774 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
LRRC28-215ENST00000559774 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
LRRC28-215ENST00000559774 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
LRRC28-215ENST00000559774 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
LRRC28-215ENST00000559774 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
LRRC28-215ENST00000559774 INE1O15225 51 aa1.9□□□□□ -2.11
LRRC28-215ENST00000559774 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
LRRC28-215ENST00000559774 PRM1P04553 51 aa1.67□□□□□ -2.14
LRRC28-215ENST00000559774 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
LRRC28-215ENST00000559774 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
LRRC28-215ENST00000559774 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
LRRC28-215ENST00000559774 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms