RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 VPS13CQ709C8 3753 aa-0.86□□□□□ -2.55
CTDSPL2-207ENST00000559738 PRUNE2Q8WUY3 3088 aa-0.87□□□□□ -2.55
CTDSPL2-207ENST00000559738 CFAP54Q96N23 3096 aa-0.87□□□□□ -2.55
CTDSPL2-207ENST00000559738 RPL39P62891 51 aaKnown RBP-0.87□□□□□ -2.55
CTDSPL2-207ENST00000559738 MT1HL1P0DM35 61 aa-0.88□□□□□ -2.55
CTDSPL2-207ENST00000559738 CEP250Q9BV73 2442 aa-0.89□□□□□ -2.55
CTDSPL2-207ENST00000559738 TOP2AP11388 1531 aaKnown RBP-0.89□□□□□ -2.55
CTDSPL2-207ENST00000559738 DUOX1Q9NRD9 1551 aa-0.9□□□□□ -2.55
CTDSPL2-207ENST00000559738 FRYLO94915 3013 aa-0.93□□□□□ -2.56
CTDSPL2-207ENST00000559738 ATMQ13315 3056 aa-0.94□□□□□ -2.56
CTDSPL2-207ENST00000559738 MROH2BQ7Z745 1585 aa-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 MT2AP02795 61 aa-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 LINC01590Q5TEZ4 76 aa-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 MT1MQ8N339 61 aa-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 RPL39LQ96EH5 51 aaKnown RBP-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 MYO15AQ9UKN7 3530 aa-0.95□□□□□ -2.56
CTDSPL2-207ENST00000559738 FREM2Q5SZK8 3169 aa-1□□□□□ -2.57
CTDSPL2-207ENST00000559738 DMDP11532 3685 aa-1.01□□□□□ -2.57
CTDSPL2-207ENST00000559738 RHPN1-AS1Q9BWJ2 59 aa-1.03□□□□□ -2.57
CTDSPL2-207ENST00000559738 RPS29P62273 56 aaKnown RBP-1.07□□□□□ -2.58
CTDSPL2-207ENST00000559738 PCNTO95613 3336 aa-1.07□□□□□ -2.58
CTDSPL2-207ENST00000559738 GCC2Q8IWJ2 1684 aa-1.08□□□□□ -2.58
CTDSPL2-207ENST00000559738 WDFY4Q6ZS81 3184 aa-1.09□□□□□ -2.58
CTDSPL2-207ENST00000559738 CEP350Q5VT06 3117 aa-1.09□□□□□ -2.58
CTDSPL2-207ENST00000559738 A0A096LNI7 61 aa-1.11□□□□□ -2.59
CTDSPL2-207ENST00000559738 DEFB104AQ8WTQ1 72 aa-1.12□□□□□ -2.59
CTDSPL2-207ENST00000559738 ABCA13Q86UQ4 5058 aa-1.13□□□□□ -2.59
CTDSPL2-207ENST00000559738 MT1BP07438 61 aa-1.13□□□□□ -2.59
CTDSPL2-207ENST00000559738 WDFY3Q8IZQ1 3526 aa-1.14□□□□□ -2.59
CTDSPL2-207ENST00000559738 DNAH12Q6ZR08 3092 aa-1.14□□□□□ -2.59
CTDSPL2-207ENST00000559738 MUC3AQ02505 3323 aa-1.14□□□□□ -2.59
CTDSPL2-207ENST00000559738 SZT2Q5T011 3432 aa-1.15□□□□□ -2.59
CTDSPL2-207ENST00000559738 HTN1P15515 57 aa-1.16□□□□□ -2.6
CTDSPL2-207ENST00000559738 DEFB133Q30KQ1 61 aa-1.16□□□□□ -2.6
CTDSPL2-207ENST00000559738 BOD1L1Q8NFC6 3051 aa-1.17□□□□□ -2.6
CTDSPL2-207ENST00000559738 SNRPGP62308 76 aaKnown RBP-1.18□□□□□ -2.6
CTDSPL2-207ENST00000559738 CENPEQ02224 2701 aa-1.19□□□□□ -2.6
CTDSPL2-207ENST00000559738 XIRP2A4UGR9 3374 aa-1.22□□□□□ -2.6
CTDSPL2-207ENST00000559738 SPEGQ15772 3267 aa-1.25□□□□□ -2.61
CTDSPL2-207ENST00000559738 MKI67P46013 3256 aaKnown RBP-1.26□□□□□ -2.61
CTDSPL2-207ENST00000559738 DEFB124Q8NES8 71 aa-1.27□□□□□ -2.61
CTDSPL2-207ENST00000559738 TTTY10Q9BZA0 68 aa-1.3□□□□□ -2.62
CTDSPL2-207ENST00000559738 MT1FP04733 61 aa-1.32□□□□□ -2.62
CTDSPL2-207ENST00000559738 CD52P31358 61 aa-1.32□□□□□ -2.62
CTDSPL2-207ENST00000559738 DCHS1Q96JQ0 3298 aa-1.34□□□□□ -2.62
CTDSPL2-207ENST00000559738 ARHGAP5-AS1Q96IT6 56 aa-1.34□□□□□ -2.62
CTDSPL2-207ENST00000559738 EP400Q96L91 3159 aa-1.35□□□□□ -2.63
CTDSPL2-207ENST00000559738 K7EIM0 57 aa-1.36□□□□□ -2.63
CTDSPL2-207ENST00000559738 USP34Q70CQ2 3546 aa-1.36□□□□□ -2.63
CTDSPL2-207ENST00000559738 H3BUX3 64 aa-1.37□□□□□ -2.63
CTDSPL2-207ENST00000559738 LOC400499M0QZD8 3231 aa-1.39□□□□□ -2.63
CTDSPL2-207ENST00000559738 PRCDQ00LT1 54 aa-1.39□□□□□ -2.63
CTDSPL2-207ENST00000559738 UNC80Q8N2C7 3258 aa-1.44□□□□□ -2.64
CTDSPL2-207ENST00000559738 ASPMQ8IZT6 3477 aa-1.45□□□□□ -2.64
CTDSPL2-207ENST00000559738 CFAP47Q6ZTR5 3102 aa-1.46□□□□□ -2.64
CTDSPL2-207ENST00000559738 KRTAP20-1Q3LI63 56 aa-1.47□□□□□ -2.64
CTDSPL2-207ENST00000559738 DNAH14Q0VDD8 3507 aa-1.54□□□□□ -2.66
CTDSPL2-207ENST00000559738 LINC01556Q5JQF7 62 aa-1.54□□□□□ -2.66
CTDSPL2-207ENST00000559738 H3BSH0 61 aa-1.55□□□□□ -2.66
CTDSPL2-207ENST00000559738 TMEM167AQ8TBQ9 72 aa-1.56□□□□□ -2.66
CTDSPL2-207ENST00000559738 BRCA2P51587 3418 aa-1.58□□□□□ -2.66
CTDSPL2-207ENST00000559738 RPL39P5Q59GN2 51 aa-1.66□□□□□ -2.68
CTDSPL2-207ENST00000559738 A0A096LPF7 62 aa-1.67□□□□□ -2.68
CTDSPL2-207ENST00000559738 APELAP0DMC3 54 aa-1.67□□□□□ -2.68
CTDSPL2-207ENST00000559738 VCANP13611 3396 aa-1.68□□□□□ -2.68
CTDSPL2-207ENST00000559738 KRTAP19-2Q3LHN2 52 aa-1.7□□□□□ -2.68
CTDSPL2-207ENST00000559738 CENPFP49454 3210 aa-1.72□□□□□ -2.69
CTDSPL2-207ENST00000559738 DEFB108AA8MXU0 73 aa-1.73□□□□□ -2.69
CTDSPL2-207ENST00000559738 KRTAP19-6Q3LI70 58 aa-1.73□□□□□ -2.69
CTDSPL2-207ENST00000559738 CDH23Q9H251 3354 aa-1.8□□□□□ -2.7
CTDSPL2-207ENST00000559738 VPS13AQ96RL7 3174 aa-1.85□□□□□ -2.71
CTDSPL2-207ENST00000559738 HTN3P15516 51 aa-1.91□□□□□ -2.72
CTDSPL2-207ENST00000559738 UTRNP46939 3433 aa-1.93□□□□□ -2.72
CTDSPL2-207ENST00000559738 Q9Y3F1 56 aa-1.98□□□□□ -2.73
CTDSPL2-207ENST00000559738 GOLGB1Q14789 3259 aaKnown RBP-2.13□□□□□ -2.75
CTDSPL2-207ENST00000559738 DEFB108BQ8NET1 73 aa-2.16□□□□□ -2.76
CTDSPL2-207ENST00000559738 COX14Q96I36 57 aa-2.24□□□□□ -2.77
CTDSPL2-207ENST00000559738 STATHP02808 62 aa-2.44□□□□□ -2.8
Retrieved 78 of 20,778 RNA–protein pairs in 99.9 ms