RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KRTAP2-1Q9BYU5 128 aa7.37□□□□□ -1.23
TSPAN3-207ENST00000559494 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
TSPAN3-207ENST00000559494 ROMO1P60602 79 aa7.3□□□□□ -1.24
TSPAN3-207ENST00000559494 BRK1Q8WUW1 75 aa7.29□□□□□ -1.24
TSPAN3-207ENST00000559494 MT1GP13640 62 aa7.25□□□□□ -1.25
TSPAN3-207ENST00000559494 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
TSPAN3-207ENST00000559494 MT1LQ93083 61 aa7.25□□□□□ -1.25
TSPAN3-207ENST00000559494 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
TSPAN3-207ENST00000559494 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
TSPAN3-207ENST00000559494 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
TSPAN3-207ENST00000559494 MT1MQ8N339 61 aa7.13□□□□□ -1.27
TSPAN3-207ENST00000559494 DSTQ03001 7570 aaKnown RBP7.12□□□□□ -1.27
TSPAN3-207ENST00000559494 GPR98Q8WXG9 6306 aa7.11□□□□□ -1.27
TSPAN3-207ENST00000559494 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
TSPAN3-207ENST00000559494 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
TSPAN3-207ENST00000559494 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
TSPAN3-207ENST00000559494 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
TSPAN3-207ENST00000559494 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
TSPAN3-207ENST00000559494 PRO0628Q9UI54 55 aa6.77□□□□□ -1.32
TSPAN3-207ENST00000559494 KRTAP4-9Q9BYQ8 210 aa6.72□□□□□ -1.33
TSPAN3-207ENST00000559494 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
TSPAN3-207ENST00000559494 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
TSPAN3-207ENST00000559494 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
TSPAN3-207ENST00000559494 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
TSPAN3-207ENST00000559494 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
TSPAN3-207ENST00000559494 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
TSPAN3-207ENST00000559494 MT4P47944 62 aa6.51□□□□□ -1.37
TSPAN3-207ENST00000559494 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
TSPAN3-207ENST00000559494 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
TSPAN3-207ENST00000559494 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
TSPAN3-207ENST00000559494 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
TSPAN3-207ENST00000559494 KTN1-AS1Q86SY8 53 aa6.37□□□□□ -1.39
TSPAN3-207ENST00000559494 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
TSPAN3-207ENST00000559494 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
TSPAN3-207ENST00000559494 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
TSPAN3-207ENST00000559494 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
TSPAN3-207ENST00000559494 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
TSPAN3-207ENST00000559494 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
TSPAN3-207ENST00000559494 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
TSPAN3-207ENST00000559494 MT1AP04731 61 aa6.17□□□□□ -1.42
TSPAN3-207ENST00000559494 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
TSPAN3-207ENST00000559494 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
TSPAN3-207ENST00000559494 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
TSPAN3-207ENST00000559494 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
TSPAN3-207ENST00000559494 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
TSPAN3-207ENST00000559494 KRTAP6-2Q3LI66 62 aa5.77□□□□□ -1.49
TSPAN3-207ENST00000559494 MT3P25713 68 aa5.62□□□□□ -1.51
TSPAN3-207ENST00000559494 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
TSPAN3-207ENST00000559494 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
TSPAN3-207ENST00000559494 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
TSPAN3-207ENST00000559494 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
TSPAN3-207ENST00000559494 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
TSPAN3-207ENST00000559494 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
TSPAN3-207ENST00000559494 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
TSPAN3-207ENST00000559494 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
TSPAN3-207ENST00000559494 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
TSPAN3-207ENST00000559494 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
TSPAN3-207ENST00000559494 H3BS24 57 aa5.04□□□□□ -1.6
TSPAN3-207ENST00000559494 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
TSPAN3-207ENST00000559494 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
TSPAN3-207ENST00000559494 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
TSPAN3-207ENST00000559494 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
TSPAN3-207ENST00000559494 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
TSPAN3-207ENST00000559494 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
TSPAN3-207ENST00000559494 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
TSPAN3-207ENST00000559494 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
TSPAN3-207ENST00000559494 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
TSPAN3-207ENST00000559494 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
TSPAN3-207ENST00000559494 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TSPAN3-207ENST00000559494 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
TSPAN3-207ENST00000559494 INE1O15225 51 aa3.91□□□□□ -1.78
TSPAN3-207ENST00000559494 PRM1P04553 51 aa3.79□□□□□ -1.8
TSPAN3-207ENST00000559494 PHGR1C9JFL3 82 aa3.71□□□□□ -1.81
TSPAN3-207ENST00000559494 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
TSPAN3-207ENST00000559494 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
TSPAN3-207ENST00000559494 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
TSPAN3-207ENST00000559494 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 82.8 ms