RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SPRR2DP22532 72 aa4.24□□□□□ -1.73
SPG11-216ENST00000559347 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
SPG11-216ENST00000559347 A0A0D9SG42 100 aa4.23□□□□□ -1.73
SPG11-216ENST00000559347 A0A1B0GU33 70 aa4.22□□□□□ -1.73
SPG11-216ENST00000559347 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
SPG11-216ENST00000559347 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
SPG11-216ENST00000559347 A0A1B0GU69 56 aa4.16□□□□□ -1.74
SPG11-216ENST00000559347 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
SPG11-216ENST00000559347 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
SPG11-216ENST00000559347 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
SPG11-216ENST00000559347 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SPG11-216ENST00000559347 K7ERS5 55 aa4.13□□□□□ -1.75
SPG11-216ENST00000559347 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
SPG11-216ENST00000559347 A8MU10 97 aa4.09□□□□□ -1.75
SPG11-216ENST00000559347 MT1EP04732 61 aa4.09□□□□□ -1.75
SPG11-216ENST00000559347 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
SPG11-216ENST00000559347 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
SPG11-216ENST00000559347 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
SPG11-216ENST00000559347 A6NED7 52 aa4.01□□□□□ -1.77
SPG11-216ENST00000559347 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
SPG11-216ENST00000559347 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
SPG11-216ENST00000559347 Q1T7F1 81 aa3.99□□□□□ -1.77
SPG11-216ENST00000559347 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
SPG11-216ENST00000559347 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SPG11-216ENST00000559347 TNP1P09430 55 aa3.94□□□□□ -1.78
SPG11-216ENST00000559347 MT1GP13640 62 aa3.93□□□□□ -1.78
SPG11-216ENST00000559347 ROMO1P60602 79 aa3.93□□□□□ -1.78
SPG11-216ENST00000559347 UQCR11O14957 56 aa3.91□□□□□ -1.78
SPG11-216ENST00000559347 MT1LQ93083 61 aa3.91□□□□□ -1.78
SPG11-216ENST00000559347 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
SPG11-216ENST00000559347 MT1MQ8N339 61 aa3.89□□□□□ -1.79
SPG11-216ENST00000559347 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
SPG11-216ENST00000559347 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
SPG11-216ENST00000559347 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
SPG11-216ENST00000559347 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
SPG11-216ENST00000559347 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SPG11-216ENST00000559347 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
SPG11-216ENST00000559347 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
SPG11-216ENST00000559347 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
SPG11-216ENST00000559347 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
SPG11-216ENST00000559347 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SPG11-216ENST00000559347 MT4P47944 62 aa3.69□□□□□ -1.82
SPG11-216ENST00000559347 MT3P25713 68 aa3.66□□□□□ -1.82
SPG11-216ENST00000559347 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
SPG11-216ENST00000559347 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
SPG11-216ENST00000559347 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
SPG11-216ENST00000559347 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
SPG11-216ENST00000559347 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
SPG11-216ENST00000559347 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
SPG11-216ENST00000559347 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
SPG11-216ENST00000559347 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
SPG11-216ENST00000559347 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SPG11-216ENST00000559347 KRTAP12-4P60329 112 aa3.43□□□□□ -1.86
SPG11-216ENST00000559347 MT1AP04731 61 aa3.33□□□□□ -1.88
SPG11-216ENST00000559347 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
SPG11-216ENST00000559347 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
SPG11-216ENST00000559347 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
SPG11-216ENST00000559347 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SPG11-216ENST00000559347 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
SPG11-216ENST00000559347 INE1O15225 51 aa3.23□□□□□ -1.89
SPG11-216ENST00000559347 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
SPG11-216ENST00000559347 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
SPG11-216ENST00000559347 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SPG11-216ENST00000559347 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
SPG11-216ENST00000559347 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
SPG11-216ENST00000559347 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SPG11-216ENST00000559347 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
SPG11-216ENST00000559347 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
SPG11-216ENST00000559347 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
SPG11-216ENST00000559347 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SPG11-216ENST00000559347 LCE1CQ5T751 118 aa2.58□□□□□ -2
SPG11-216ENST00000559347 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
SPG11-216ENST00000559347 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SPG11-216ENST00000559347 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SPG11-216ENST00000559347 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
SPG11-216ENST00000559347 PRM1P04553 51 aa1.8□□□□□ -2.12
SPG11-216ENST00000559347 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
SPG11-216ENST00000559347 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 108 ms