RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
SNRPA1-207ENST00000559309 K7ERS5 55 aa5.76□□□□□ -1.49
SNRPA1-207ENST00000559309 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SNRPA1-207ENST00000559309 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
SNRPA1-207ENST00000559309 TNP1P09430 55 aa5.67□□□□□ -1.5
SNRPA1-207ENST00000559309 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
SNRPA1-207ENST00000559309 SPRR2EP22531 72 aa5.64□□□□□ -1.51
SNRPA1-207ENST00000559309 SPRR2BP35325 72 aa5.64□□□□□ -1.51
SNRPA1-207ENST00000559309 SPRR2AP35326 72 aa5.64□□□□□ -1.51
SNRPA1-207ENST00000559309 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SNRPA1-207ENST00000559309 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
SNRPA1-207ENST00000559309 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
SNRPA1-207ENST00000559309 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
SNRPA1-207ENST00000559309 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
SNRPA1-207ENST00000559309 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
SNRPA1-207ENST00000559309 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
SNRPA1-207ENST00000559309 ROMO1P60602 79 aa5.54□□□□□ -1.52
SNRPA1-207ENST00000559309 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
SNRPA1-207ENST00000559309 MT1EP04732 61 aa5.49□□□□□ -1.53
SNRPA1-207ENST00000559309 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
SNRPA1-207ENST00000559309 SPRR2DP22532 72 aa5.46□□□□□ -1.54
SNRPA1-207ENST00000559309 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
SNRPA1-207ENST00000559309 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
SNRPA1-207ENST00000559309 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
SNRPA1-207ENST00000559309 MT1LQ93083 61 aa5.31□□□□□ -1.56
SNRPA1-207ENST00000559309 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
SNRPA1-207ENST00000559309 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
SNRPA1-207ENST00000559309 MT1GP13640 62 aa5.26□□□□□ -1.57
SNRPA1-207ENST00000559309 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
SNRPA1-207ENST00000559309 MT1MQ8N339 61 aa5.18□□□□□ -1.58
SNRPA1-207ENST00000559309 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
SNRPA1-207ENST00000559309 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SNRPA1-207ENST00000559309 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SNRPA1-207ENST00000559309 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SNRPA1-207ENST00000559309 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
SNRPA1-207ENST00000559309 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
SNRPA1-207ENST00000559309 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
SNRPA1-207ENST00000559309 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SNRPA1-207ENST00000559309 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
SNRPA1-207ENST00000559309 MT4P47944 62 aa4.78□□□□□ -1.64
SNRPA1-207ENST00000559309 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
SNRPA1-207ENST00000559309 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
SNRPA1-207ENST00000559309 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
SNRPA1-207ENST00000559309 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SNRPA1-207ENST00000559309 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
SNRPA1-207ENST00000559309 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
SNRPA1-207ENST00000559309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
SNRPA1-207ENST00000559309 MT1AP04731 61 aa4.52□□□□□ -1.69
SNRPA1-207ENST00000559309 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
SNRPA1-207ENST00000559309 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
SNRPA1-207ENST00000559309 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
SNRPA1-207ENST00000559309 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
SNRPA1-207ENST00000559309 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
SNRPA1-207ENST00000559309 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
SNRPA1-207ENST00000559309 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SNRPA1-207ENST00000559309 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
SNRPA1-207ENST00000559309 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
SNRPA1-207ENST00000559309 MT3P25713 68 aa4.09□□□□□ -1.75
SNRPA1-207ENST00000559309 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SNRPA1-207ENST00000559309 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
SNRPA1-207ENST00000559309 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
SNRPA1-207ENST00000559309 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
SNRPA1-207ENST00000559309 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
SNRPA1-207ENST00000559309 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SNRPA1-207ENST00000559309 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
SNRPA1-207ENST00000559309 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
SNRPA1-207ENST00000559309 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
SNRPA1-207ENST00000559309 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SNRPA1-207ENST00000559309 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SNRPA1-207ENST00000559309 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SNRPA1-207ENST00000559309 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SNRPA1-207ENST00000559309 INE1O15225 51 aa3.09□□□□□ -1.91
SNRPA1-207ENST00000559309 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
SNRPA1-207ENST00000559309 PRM1P04553 51 aa2.84□□□□□ -1.95
SNRPA1-207ENST00000559309 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SNRPA1-207ENST00000559309 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SNRPA1-207ENST00000559309 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SNRPA1-207ENST00000559309 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms