RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 H3BVH4 76 aa0.3□□□□□ -2.36
CTDSPL2-202ENST00000558373 SPTAN1Q13813 2472 aaKnown RBP0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 TOMM7Q9P0U1 55 aa0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 WNK1Q9H4A3 2382 aa0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 TTTY10Q9BZA0 68 aa0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 HECTD1Q9ULT8 2610 aa0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
CTDSPL2-202ENST00000558373 MT1HP80294 61 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 DEFB106AQ8N104 65 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 TGP01266 2768 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 STAB2Q8WWQ8 2551 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 DEFB105AQ8NG35 78 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 NBASA2RRP1 2371 aa0.28□□□□□ -2.36
CTDSPL2-202ENST00000558373 APLNQ9ULZ1 77 aa0.28□□□□□ -2.37
CTDSPL2-202ENST00000558373 FLNAP21333 2647 aaKnown RBP0.28□□□□□ -2.37
CTDSPL2-202ENST00000558373 MED13LQ71F56 2210 aa0.28□□□□□ -2.37
CTDSPL2-202ENST00000558373 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 POLQO75417 2590 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1AP04731 61 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 DEFB1P60022 68 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 NBEAL1Q6ZS30 2694 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 DNAJC13O75165 2243 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1EP04732 61 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 HTN1P15515 57 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 KRTAP19-3Q7Z4W3 81 aa0.27□□□□□ -2.37
CTDSPL2-202ENST00000558373 ITPR2Q14571 2701 aa0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 KIAA0100Q14667 2235 aaKnown RBP0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 DEFB110Q30KQ9 67 aa0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 USP9YO00507 2555 aaPredicted RBP0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 PLCE1Q9P212 2302 aa0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 KRTAP8-1Q8IUC2 63 aa0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
CTDSPL2-202ENST00000558373 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 RPL39P5Q59GN2 51 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 DEFB108BQ8NET1 73 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 CEP250Q9BV73 2442 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 DEFB108AA8MXU0 73 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1FP04733 61 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1GP13640 62 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
CTDSPL2-202ENST00000558373 A0A096LPF7 62 aa0.24□□□□□ -2.37
CTDSPL2-202ENST00000558373 STATHP02808 62 aa0.24□□□□□ -2.37
CTDSPL2-202ENST00000558373 H3BSH0 61 aa0.24□□□□□ -2.37
CTDSPL2-202ENST00000558373 SPRR2DP22532 72 aa0.24□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1LQ93083 61 aa0.24□□□□□ -2.37
CTDSPL2-202ENST00000558373 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 SMR3BP02814 79 aaPredicted RBP0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 SPRR2EP22531 72 aa0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 KRTAP19-8Q3LI54 63 aa0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1MQ8N339 61 aa0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 MYO9AB2RTY4 2548 aa0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 SPRR2FQ96RM1 72 aa0.23□□□□□ -2.37
CTDSPL2-202ENST00000558373 TLN2Q9Y4G6 2542 aa0.22□□□□□ -2.37
CTDSPL2-202ENST00000558373 PHGR1C9JFL3 82 aa0.22□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT2AP02795 61 aa0.22□□□□□ -2.37
CTDSPL2-202ENST00000558373 MTORP42345 2549 aa0.22□□□□□ -2.37
CTDSPL2-202ENST00000558373 WFDC10BQ8IUB3 73 aa0.22□□□□□ -2.37
CTDSPL2-202ENST00000558373 MT1BP07438 61 aa0.21□□□□□ -2.38
CTDSPL2-202ENST00000558373 ANKRD11Q6UB99 2663 aaPredicted RBP0.21□□□□□ -2.38
CTDSPL2-202ENST00000558373 HTN3P15516 51 aa0.2□□□□□ -2.38
CTDSPL2-202ENST00000558373 MT1XP80297 61 aa0.2□□□□□ -2.38
CTDSPL2-202ENST00000558373 KRTAP19-6Q3LI70 58 aa0.2□□□□□ -2.38
CTDSPL2-202ENST00000558373 A0A096LNI7 61 aa0.19□□□□□ -2.38
CTDSPL2-202ENST00000558373 KRTAP6-1Q3LI64 71 aa0.19□□□□□ -2.38
CTDSPL2-202ENST00000558373 ACACAQ13085 2346 aa0.19□□□□□ -2.38
CTDSPL2-202ENST00000558373 FLNBO75369 2602 aaKnown RBP0.18□□□□□ -2.38
CTDSPL2-202ENST00000558373 KRTAP19-7Q3SYF9 63 aa0.18□□□□□ -2.38
CTDSPL2-202ENST00000558373 KNL1Q8NG31 2342 aa0.18□□□□□ -2.38
CTDSPL2-202ENST00000558373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.18□□□□□ -2.389e-9■■■■■ 32.9
CTDSPL2-202ENST00000558373 ATRQ13535 2644 aa0.18□□□□□ -2.38
CTDSPL2-202ENST00000558373 PRM1P04553 51 aa0.16□□□□□ -2.38
CTDSPL2-202ENST00000558373 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
CTDSPL2-202ENST00000558373 DEFB4AO15263 64 aa0.15□□□□□ -2.39
CTDSPL2-202ENST00000558373 APELAP0DMC3 54 aa0.13□□□□□ -2.39
CTDSPL2-202ENST00000558373 MT4P47944 62 aa0.13□□□□□ -2.39
CTDSPL2-202ENST00000558373 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
CTDSPL2-202ENST00000558373 CEP295Q9C0D2 2601 aa0.08□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 100.3 ms