RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 A0A0B4J2C4 111 aa1.77□□□□□ -2.13
SCFD1-223ENST00000557076 ACYP1P07311 99 aa1.77□□□□□ -2.13
SCFD1-223ENST00000557076 FXYD2P54710 66 aa1.77□□□□□ -2.13
SCFD1-223ENST00000557076 CYSTM1Q9H1C7 97 aa1.76□□□□□ -2.13
SCFD1-223ENST00000557076 H3BPC8 53 aa1.75□□□□□ -2.13
SCFD1-223ENST00000557076 ROMO1P60602 79 aa1.75□□□□□ -2.13
SCFD1-223ENST00000557076 CYP4F30PQ9H0H9 118 aa1.75□□□□□ -2.13
SCFD1-223ENST00000557076 PRO1854Q9UHT4 67 aa1.75□□□□□ -2.13
SCFD1-223ENST00000557076 TRAV7A0A075B6U4 112 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 MT1GP13640 62 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 LINC00643Q86TS7 51 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 C14orf132Q9NPU4 83 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 HIGD1BQ9P298 99 aa1.74□□□□□ -2.13
SCFD1-223ENST00000557076 MT1EP04732 61 aa1.73□□□□□ -2.13
SCFD1-223ENST00000557076 NREPQ16612 68 aa1.73□□□□□ -2.13
SCFD1-223ENST00000557076 CASC2Q6XLA1 102 aa1.73□□□□□ -2.13
SCFD1-223ENST00000557076 SPANXA2-OT1Q8N9U9 137 aa1.73□□□□□ -2.13
SCFD1-223ENST00000557076 A0A087WVE0 104 aa1.72□□□□□ -2.13
SCFD1-223ENST00000557076 HCG22E2RYF7 251 aa1.72□□□□□ -2.13
SCFD1-223ENST00000557076 H7BZZ5 65 aa1.72□□□□□ -2.13
SCFD1-223ENST00000557076 SPTSSBQ8NFR3 76 aa1.72□□□□□ -2.13
SCFD1-223ENST00000557076 COX6CP09669 75 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 BAALC-AS2P0C853 105 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 COX8AP10176 69 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 R4GN34 69 aa1.71□□□□□ -2.14
SCFD1-223ENST00000557076 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
SCFD1-223ENST00000557076 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SCFD1-223ENST00000557076 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
SCFD1-223ENST00000557076 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-223ENST00000557076 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SCFD1-223ENST00000557076 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
SCFD1-223ENST00000557076 TRAV22A0A0B4J277 110 aa1.67□□□□□ -2.14
SCFD1-223ENST00000557076 M0QZ58 72 aa1.67□□□□□ -2.14
SCFD1-223ENST00000557076 A0A1B0GU33 70 aa1.66□□□□□ -2.14
SCFD1-223ENST00000557076 CHKB-CPT1BH3BT56 60 aa1.66□□□□□ -2.14
SCFD1-223ENST00000557076 P0C880 135 aa1.66□□□□□ -2.14
SCFD1-223ENST00000557076 C20orf197Q8N268 126 aa1.66□□□□□ -2.14
SCFD1-223ENST00000557076 MT1MQ8N339 61 aa1.66□□□□□ -2.14
SCFD1-223ENST00000557076 SPINT4Q6UDR6 99 aa1.65□□□□□ -2.15
SCFD1-223ENST00000557076 TP53AIP1Q9HCN2 124 aa1.64□□□□□ -2.15
SCFD1-223ENST00000557076 LOC101927531A0A1B0GV80 90 aa1.63□□□□□ -2.15
SCFD1-223ENST00000557076 ATP5EP2Q5VTU8 51 aa1.63□□□□□ -2.15
SCFD1-223ENST00000557076 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
SCFD1-223ENST00000557076 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
SCFD1-223ENST00000557076 ATXN8Q156A1 80 aa1.62□□□□□ -2.15
SCFD1-223ENST00000557076 KRTAP25-1Q3LHN0 102 aa1.62□□□□□ -2.15
SCFD1-223ENST00000557076 DMAC1Q96GE9 116 aa1.62□□□□□ -2.15
SCFD1-223ENST00000557076 KRTAP19-5Q3LI72 72 aa1.61□□□□□ -2.15
SCFD1-223ENST00000557076 MT1LQ93083 61 aa1.61□□□□□ -2.15
SCFD1-223ENST00000557076 PRR15LQ9BU68 103 aa1.57□□□□□ -2.16
SCFD1-223ENST00000557076 SNURFQ9Y675 71 aa1.56□□□□□ -2.16
SCFD1-223ENST00000557076 LINC01558Q9Y6Z2 57 aa1.56□□□□□ -2.16
SCFD1-223ENST00000557076 A0A0D9SG42 100 aa1.54□□□□□ -2.16
SCFD1-223ENST00000557076 UQCR11O14957 56 aa1.53□□□□□ -2.16
SCFD1-223ENST00000557076 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
SCFD1-223ENST00000557076 LINC00208Q96KT6 92 aa1.5□□□□□ -2.17
SCFD1-223ENST00000557076 UBL5Q9BZL1 73 aa1.5□□□□□ -2.17
SCFD1-223ENST00000557076 H0Y9P7 68 aa1.49□□□□□ -2.17
SCFD1-223ENST00000557076 SPATA8Q6RVD6 105 aa1.49□□□□□ -2.17
SCFD1-223ENST00000557076 INE1O15225 51 aa1.45□□□□□ -2.18
SCFD1-223ENST00000557076 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
SCFD1-223ENST00000557076 ACYP2P14621 99 aa1.43□□□□□ -2.18
SCFD1-223ENST00000557076 A0A1B0GU69 56 aa1.41□□□□□ -2.18
SCFD1-223ENST00000557076 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
SCFD1-223ENST00000557076 COA5Q86WW8 74 aa1.4□□□□□ -2.19
SCFD1-223ENST00000557076 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
SCFD1-223ENST00000557076 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
SCFD1-223ENST00000557076 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
SCFD1-223ENST00000557076 MT1AP04731 61 aa1.36□□□□□ -2.19
SCFD1-223ENST00000557076 TNP1P09430 55 aa1.34□□□□□ -2.19
SCFD1-223ENST00000557076 KRTAP12-1P59990 96 aa1.31□□□□□ -2.2
SCFD1-223ENST00000557076 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
SCFD1-223ENST00000557076 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
SCFD1-223ENST00000557076 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
SCFD1-223ENST00000557076 PRM1P04553 51 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 111.5 ms