RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
HNRNPC-228ENST00000557033 SPRR2EP22531 72 aa3.96□□□□□ -1.78
HNRNPC-228ENST00000557033 SPRR2BP35325 72 aa3.96□□□□□ -1.78
HNRNPC-228ENST00000557033 SPRR2AP35326 72 aa3.96□□□□□ -1.78
HNRNPC-228ENST00000557033 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
HNRNPC-228ENST00000557033 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
HNRNPC-228ENST00000557033 SERP2Q8N6R1 65 aa3.88□□□□□ -1.79
HNRNPC-228ENST00000557033 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
HNRNPC-228ENST00000557033 ROMO1P60602 79 aa3.84□□□□□ -1.79
HNRNPC-228ENST00000557033 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
HNRNPC-228ENST00000557033 SPRR2DP22532 72 aa3.83□□□□□ -1.8
HNRNPC-228ENST00000557033 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
HNRNPC-228ENST00000557033 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
HNRNPC-228ENST00000557033 Q1T7F1 81 aa3.78□□□□□ -1.8
HNRNPC-228ENST00000557033 COA5Q86WW8 74 aa3.78□□□□□ -1.8
HNRNPC-228ENST00000557033 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
HNRNPC-228ENST00000557033 COX7CP15954 63 aa3.75□□□□□ -1.81
HNRNPC-228ENST00000557033 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
HNRNPC-228ENST00000557033 A0A0D9SG42 100 aa3.69□□□□□ -1.82
HNRNPC-228ENST00000557033 H7BZZ5 65 aa3.69□□□□□ -1.82
HNRNPC-228ENST00000557033 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
HNRNPC-228ENST00000557033 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
HNRNPC-228ENST00000557033 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
HNRNPC-228ENST00000557033 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.83
HNRNPC-228ENST00000557033 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
HNRNPC-228ENST00000557033 MT1EP04732 61 aa3.63□□□□□ -1.83
HNRNPC-228ENST00000557033 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
HNRNPC-228ENST00000557033 A0A1B0GU69 56 aa3.62□□□□□ -1.83
HNRNPC-228ENST00000557033 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
HNRNPC-228ENST00000557033 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
HNRNPC-228ENST00000557033 MT1GP13640 62 aa3.56□□□□□ -1.84
HNRNPC-228ENST00000557033 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
HNRNPC-228ENST00000557033 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
HNRNPC-228ENST00000557033 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
HNRNPC-228ENST00000557033 TNP1P09430 55 aa3.5□□□□□ -1.85
HNRNPC-228ENST00000557033 ATP5EP56381 51 aaPredicted RBP3.5□□□□□ -1.85
HNRNPC-228ENST00000557033 MIR22HGQ0VDD5 57 aa3.5□□□□□ -1.85
HNRNPC-228ENST00000557033 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
HNRNPC-228ENST00000557033 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
HNRNPC-228ENST00000557033 CCDC179H3BU77 68 aa3.48□□□□□ -1.85
HNRNPC-228ENST00000557033 MT1MQ8N339 61 aa3.46□□□□□ -1.86
HNRNPC-228ENST00000557033 MT1LQ93083 61 aa3.46□□□□□ -1.86
HNRNPC-228ENST00000557033 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
HNRNPC-228ENST00000557033 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
HNRNPC-228ENST00000557033 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
HNRNPC-228ENST00000557033 UQCR11O14957 56 aa3.4□□□□□ -1.87
HNRNPC-228ENST00000557033 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
HNRNPC-228ENST00000557033 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
HNRNPC-228ENST00000557033 INE1O15225 51 aa3.34□□□□□ -1.87
HNRNPC-228ENST00000557033 MT4P47944 62 aa3.34□□□□□ -1.87
HNRNPC-228ENST00000557033 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
HNRNPC-228ENST00000557033 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
HNRNPC-228ENST00000557033 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
HNRNPC-228ENST00000557033 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
HNRNPC-228ENST00000557033 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
HNRNPC-228ENST00000557033 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
HNRNPC-228ENST00000557033 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
HNRNPC-228ENST00000557033 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
HNRNPC-228ENST00000557033 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
HNRNPC-228ENST00000557033 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
HNRNPC-228ENST00000557033 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
HNRNPC-228ENST00000557033 MT1AP04731 61 aa2.96□□□□□ -1.94
HNRNPC-228ENST00000557033 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
HNRNPC-228ENST00000557033 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
HNRNPC-228ENST00000557033 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
HNRNPC-228ENST00000557033 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
HNRNPC-228ENST00000557033 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
HNRNPC-228ENST00000557033 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
HNRNPC-228ENST00000557033 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
HNRNPC-228ENST00000557033 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
HNRNPC-228ENST00000557033 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
HNRNPC-228ENST00000557033 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
HNRNPC-228ENST00000557033 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
HNRNPC-228ENST00000557033 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
HNRNPC-228ENST00000557033 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
HNRNPC-228ENST00000557033 PRM1P04553 51 aa1.52□□□□□ -2.17
HNRNPC-228ENST00000557033 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
HNRNPC-228ENST00000557033 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms