RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
PSEN1-219ENST00000556951 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
PSEN1-219ENST00000556951 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
PSEN1-219ENST00000556951 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
PSEN1-219ENST00000556951 H3BS24 57 aa5.22□□□□□ -1.57
PSEN1-219ENST00000556951 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
PSEN1-219ENST00000556951 ROMO1P60602 79 aa5.15□□□□□ -1.59
PSEN1-219ENST00000556951 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
PSEN1-219ENST00000556951 MT4P47944 62 aa5.08□□□□□ -1.6
PSEN1-219ENST00000556951 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PSEN1-219ENST00000556951 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
PSEN1-219ENST00000556951 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
PSEN1-219ENST00000556951 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
PSEN1-219ENST00000556951 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
PSEN1-219ENST00000556951 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
PSEN1-219ENST00000556951 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
PSEN1-219ENST00000556951 TNP1P09430 55 aa4.98□□□□□ -1.61
PSEN1-219ENST00000556951 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
PSEN1-219ENST00000556951 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
PSEN1-219ENST00000556951 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
PSEN1-219ENST00000556951 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
PSEN1-219ENST00000556951 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
PSEN1-219ENST00000556951 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
PSEN1-219ENST00000556951 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
PSEN1-219ENST00000556951 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
PSEN1-219ENST00000556951 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
PSEN1-219ENST00000556951 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
PSEN1-219ENST00000556951 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
PSEN1-219ENST00000556951 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
PSEN1-219ENST00000556951 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
PSEN1-219ENST00000556951 MT1EP04732 61 aa4.7□□□□□ -1.66
PSEN1-219ENST00000556951 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
PSEN1-219ENST00000556951 MT1GP13640 62 aa4.58□□□□□ -1.68
PSEN1-219ENST00000556951 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
PSEN1-219ENST00000556951 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
PSEN1-219ENST00000556951 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
PSEN1-219ENST00000556951 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
PSEN1-219ENST00000556951 MT1MQ8N339 61 aa4.51□□□□□ -1.69
PSEN1-219ENST00000556951 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
PSEN1-219ENST00000556951 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
PSEN1-219ENST00000556951 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
PSEN1-219ENST00000556951 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
PSEN1-219ENST00000556951 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
PSEN1-219ENST00000556951 MT1LQ93083 61 aa4.42□□□□□ -1.7
PSEN1-219ENST00000556951 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
PSEN1-219ENST00000556951 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
PSEN1-219ENST00000556951 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
PSEN1-219ENST00000556951 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
PSEN1-219ENST00000556951 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
PSEN1-219ENST00000556951 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
PSEN1-219ENST00000556951 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
PSEN1-219ENST00000556951 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
PSEN1-219ENST00000556951 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
PSEN1-219ENST00000556951 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
PSEN1-219ENST00000556951 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
PSEN1-219ENST00000556951 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
PSEN1-219ENST00000556951 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
PSEN1-219ENST00000556951 MT1AP04731 61 aa3.74□□□□□ -1.81
PSEN1-219ENST00000556951 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
PSEN1-219ENST00000556951 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
PSEN1-219ENST00000556951 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PSEN1-219ENST00000556951 MT3P25713 68 aa3.42□□□□□ -1.86
PSEN1-219ENST00000556951 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
PSEN1-219ENST00000556951 INE1O15225 51 aa3.24□□□□□ -1.89
PSEN1-219ENST00000556951 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
PSEN1-219ENST00000556951 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
PSEN1-219ENST00000556951 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
PSEN1-219ENST00000556951 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
PSEN1-219ENST00000556951 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
PSEN1-219ENST00000556951 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
PSEN1-219ENST00000556951 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PSEN1-219ENST00000556951 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-219ENST00000556951 PRM1P04553 51 aa2.66□□□□□ -1.98
PSEN1-219ENST00000556951 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
PSEN1-219ENST00000556951 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
PSEN1-219ENST00000556951 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
PSEN1-219ENST00000556951 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PSEN1-219ENST00000556951 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms